* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘epiworldR’ ... ** this is package ‘epiworldR’ version ‘0.12.0.0’ ** package ‘epiworldR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘Debian clang version 21.1.8 (3+b1)’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMqpl9q/R.INSTALL3f03fa29226274/epiworldR/src' clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c agents.cpp -o agents.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c cpp11.cpp -o cpp11.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c db.cpp -o db.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c entities.cpp -o entities.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c epimodels.cpp -o epimodels.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c events.cpp -o events.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c lfmcmc.cpp -o lfmcmc.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c model-diagram.cpp -o model-diagram.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c model.cpp -o model.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c tool.cpp -o tool.o clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -Dprintf_epiworld=Rprintf -Depiworld_double=double '-DEPI_CHECK_USER_INTERRUPT(a)=cpp11::check_user_interrupt()' -fpic -g -O3 -Wall -pedantic -c virus.cpp -o virus.o clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o epiworldR.so agents.o cpp11.o db.o entities.o epimodels.o events.o lfmcmc.o model-diagram.o model.o tool.o virus.o -fopenmp -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMqpl9q/R.INSTALL3f03fa29226274/epiworldR/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMqpl9q/R.INSTALL3f03fa29226274/epiworldR/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMqpl9q/R.INSTALL3f03fa29226274/epiworldR/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-epiworldR/00new/epiworldR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (epiworldR)