* installing to library '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages'
* installing *source* package 'episode' ...
** package 'episode' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpVKfIRP/R.INSTALL723b65ef63c7/episode/src'
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_ctrl.cpp -o motor_ctrl.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_fit.cpp -o motor_fit.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_fun.cpp -o motor_fun.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_likeli.cpp -o motor_likeli.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_optim.cpp -o motor_optim.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_param.cpp -o motor_param.o
motor_param.cpp:257:5: warning: explicitly assigning value of variable of type 'arma::vec' (aka 'Col<double>') to itself [-Wself-assign-overloaded]
  d %= d;
  ~ ^  ~
1 warning generated.
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c motor_reg.cpp -o motor_reg.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_butcher.cpp -o ode_butcher.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_field.cpp -o ode_field.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_loss.cpp -o ode_loss.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_mapping.cpp -o ode_mapping.o
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_optim.cpp -o ode_optim.o
ode_optim.cpp:592:32: warning: unused variable 'optim_it' [-Wunused-variable]
  std::vector<optim>::iterator optim_it;
                               ^
1 warning generated.
clang++-8 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include" -I/usr/local/include   -fpic  -g -O3 -Wall -pedantic -mtune=native -c ode_solver.cpp -o ode_solver.o
clang++-8 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o episode.so RcppExports.o motor_ctrl.o motor_fit.o motor_fun.o motor_likeli.o motor_optim.o motor_param.o motor_reg.o ode_butcher.o ode_field.o ode_loss.o ode_mapping.o ode_optim.o ode_solver.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRlapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpVKfIRP/R.INSTALL723b65ef63c7/episode/src'
make[1]: Entering directory '/tmp/RtmpVKfIRP/R.INSTALL723b65ef63c7/episode/src'
make[1]: Leaving directory '/tmp/RtmpVKfIRP/R.INSTALL723b65ef63c7/episode/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-episode/00new/episode/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (episode)