* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘eha’ ...
** package ‘eha’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 17.0.5 (1)’
using Fortran compiler: ‘Debian flang-new version 17.0.5 (1)’
make[1]: Entering directory '/tmp/Rtmp1P6Es9/R.INSTALL1420c2598d0fe3/eha/src'
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aftexpreg.c -o aftexpreg.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aftreg.c -o aftreg.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aftregGomp.c -o aftregGomp.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c c2f.c -o c2f.o
flang-new-17 -fpic -g -O2 -Wall -c chek.f -o chek.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c cleanup.f -o cleanup.o
flang-new: warning: argument unused during compilation: '-Wall'
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coxfun.c -o coxfun.o
coxfun.c:123:12: warning: variable 'h1' set but not used [-Wunused-but-set-variable]
123 | double h1, h11;
| ^
1 warning generated.
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coxfun2.c -o coxfun2.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c eha_fun.c -o eha_fun.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c eha_zeroin.c -o eha_zeroin.o
flang-new-17 -fpic -g -O2 -Wall -c expnr.f -o expnr.o
flang-new: warning: argument unused during compilation: '-Wall'
./expnr.f:70:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=1_8) vs CHARACTER(KIND=1,LEN=14_8)
call intpr( '*** Iteration ', -1, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:69:13: previous reference to 'intpr'
call intpr(" ", -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:72:13: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr( 'loglik = ', -1, loglik, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:71:13: previous reference to 'dblepr'
call dblepr( 'L2 = ', -1, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:116:10: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=1_8) vs CHARACTER(KIND=1,LEN=14_8)
call intpr( '*** Iteration ', -1, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:69:13: previous reference to 'intpr'
call intpr(" ", -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:118:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=1_8) vs CHARACTER(KIND=1,LEN=11_8)
call intpr( 'Convergence', -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:69:13: previous reference to 'intpr'
call intpr(" ", -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:120:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=1_8) vs CHARACTER(KIND=1,LEN=21_8)
call intpr( 'NOTE: No convergence!', -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:69:13: previous reference to 'intpr'
call intpr(" ", -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:122:10: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr('loglik = ', -1, loglik, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./expnr.f:71:13: previous reference to 'dblepr'
call dblepr( 'L2 = ', -1, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expreg.c -o expreg.o
expreg.c:74:16: warning: variable 's' set but not used [-Wunused-but-set-variable]
74 | double zb, s, d, ap, bdz;
| ^
expreg.c:74:19: warning: variable 'd' set but not used [-Wunused-but-set-variable]
74 | double zb, s, d, ap, bdz;
| ^
expreg.c:74:26: warning: variable 'bdz' set but not used [-Wunused-but-set-variable]
74 | double zb, s, d, ap, bdz;
| ^
3 warnings generated.
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c frail_ml.c -o frail_ml.o
flang-new-17 -fpic -g -O2 -Wall -c geomsup.f -o geomsup.o
flang-new: warning: argument unused during compilation: '-Wall'
./geomsup.f:386:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=1_8)
call intpr(" ", 1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:387:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=14_8)
call intpr('*** Iteration ', 14, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:389:13: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr('loglik = ', 9, ll, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:388:13: previous reference to 'dblepr'
call dblepr('L2 = ', 5, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:415:10: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=1_8)
call intpr(" ", 1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:416:10: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=14_8)
call intpr('*** Iteration ', 14, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:418:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=11_8)
call intpr('Convergence', -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:420:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=30_8) vs CHARACTER(KIND=1,LEN=21_8)
call intpr('NOTE: No Convergence!', -1, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:53:12: previous reference to 'intpr'
& call intpr('No convergence in [gamma_iter]', 30, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:422:10: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr('loglik = ', 9, ll, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./geomsup.f:388:13: previous reference to 'dblepr'
call dblepr('L2 = ', 5, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
flang-new-17 -fpic -g -O2 -Wall -c getHaz.f -o getHaz.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c getsums.f -o getsums.o
flang-new: warning: argument unused during compilation: '-Wall'
./getsums.f:65:16: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #5: incompatible dummy data object shapes
call daxpy(j2, tmp2, zma, 1, szz(index), 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./getsums.f:51:10: previous reference to 'daxpy'
call daxpy(k, epy, zma, 1, sz, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
flang-new-17 -fpic -g -O2 -Wall -c getsums.null.f -o getsums.null.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c ghq.f -o ghq.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c gmlfun.f -o gmlfun.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c hazards.f -o hazards.o
flang-new: warning: argument unused during compilation: '-Wall'
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loglik_ph.c -o loglik_ph.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loglik_phexp.c -o loglik_phexp.o
flang-new-17 -fpic -g -O2 -Wall -c martres.f -o martres.o
flang-new: warning: argument unused during compilation: '-Wall'
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c phexpreg.c -o phexpreg.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c phfun.c -o phfun.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c phreg.c -o phreg.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c risk.c -o risk.o
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sizes.c -o sizes.o
flang-new-17 -fpic -g -O2 -Wall -c split.f -o split.o
flang-new: warning: argument unused during compilation: '-Wall'
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sup.c -o sup.o
flang-new-17 -fpic -g -O2 -Wall -c weibnr.f -o weibnr.o
flang-new: warning: argument unused during compilation: '-Wall'
./weibnr.f:86:13: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr("loglik = ", 9, loglik, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:85:13: previous reference to 'dblepr'
call dblepr('L2 = ', 5, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:139:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=14_8) vs CHARACTER(KIND=1,LEN=11_8)
call intpr("Convergence", 11, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:84:13: previous reference to 'intpr'
call intpr("*** Iteration ", 14, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:141:13: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=14_8) vs CHARACTER(KIND=1,LEN=21_8)
call intpr("NOTE: No convergence!", 21, iter, 0)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:84:13: previous reference to 'intpr'
call intpr("*** Iteration ", 14, iter, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:143:10: warning: Reference to the procedure 'dblepr' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=5_8) vs CHARACTER(KIND=1,LEN=9_8)
call dblepr("loglik = ", 9, loglik, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./weibnr.f:85:13: previous reference to 'dblepr'
call dblepr('L2 = ', 5, L2, 1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
clang-17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weibreg.c -o weibreg.o
flang-new-17 -fpic -g -O2 -Wall -c wfunc.f -o wfunc.o
flang-new: warning: argument unused during compilation: '-Wall'
flang-new-17 -fpic -g -O2 -Wall -c wfunc.null.f -o wfunc.null.o
flang-new: warning: argument unused during compilation: '-Wall'
clang-17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o eha.so aftexpreg.o aftreg.o aftregGomp.o c2f.o chek.o cleanup.o coxfun.o coxfun2.o eha_fun.o eha_zeroin.o expnr.o expreg.o frail_ml.o geomsup.o getHaz.o getsums.o getsums.null.o ghq.o gmlfun.o hazards.o init.o loglik_ph.o loglik_phexp.o martres.o phexpreg.o phfun.o phreg.o risk.o sizes.o split.o sup.o weibnr.o weibreg.o wfunc.o wfunc.null.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-17/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/llvm-17/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp1P6Es9/R.INSTALL1420c2598d0fe3/eha/src'
make[1]: Entering directory '/tmp/Rtmp1P6Es9/R.INSTALL1420c2598d0fe3/eha/src'
make[1]: Leaving directory '/tmp/Rtmp1P6Es9/R.INSTALL1420c2598d0fe3/eha/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-eha/00new/eha/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (eha)