- using R Under development (unstable) (2026-10-18 r90707)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 23.1.3 (1)
Debian flang version 23.1.3 (1)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-10-20 00:18:34 UTC
- checking for file ‘delimtools/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘delimtools’ version ‘0.2.2’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [3s/4s] OK
- checking package namespace information ... OK
- checking package dependencies ... INFO
Packages suggested but not available for checking: 'bGMYC', 'splits'
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘delimtools’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/3s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the package can be unloaded cleanly ... [2s/3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [3s/3s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [15s/21s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... INFO
Packages unavailable to check Rd xrefs: ‘bGMYC’, ‘splits’
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [2s/3s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/6s] ERROR
Running examples in ‘delimtools-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: as_dwc
> ### Title: Rename Columns using Darwin Core Standard Terms
> ### Aliases: as_dwc
>
> ### ** Examples
>
>
> # get dwc terms and definitions
> dwc <- get_dwc(type = "simple")
Error in `dplyr::filter()`:
ℹ In argument: `&...`.
Caused by error in `dplyr::pull()`:
! Can't extract columns that don't exist.
✖ Column `simple` doesn't exist.
Backtrace:
▆
1. ├─delimtools::get_dwc(type = "simple")
2. │ ├─dplyr::distinct(...)
3. │ ├─dplyr::filter(...)
4. │ └─dplyr:::filter.data.frame(...)
5. │ └─dplyr:::filter_impl(...)
6. │ └─dplyr:::filter_rows(...)
7. │ └─dplyr:::filter_eval(...)
8. │ ├─base::withCallingHandlers(...)
9. │ └─mask$eval_all_filter(dots_expanded, invert, env_filter)
10. │ └─dplyr (local) eval()
11. ├─.data$term_localName %in% dplyr::pull(dwc, type)
12. ├─dplyr::pull(dwc, type)
13. ├─dplyr:::pull.data.frame(dwc, type)
14. │ └─tidyselect::vars_pull(names(.data), !!enquo(var))
15. │ └─tidyselect:::pull_as_location2(...)
16. │ ├─tidyselect:::with_subscript_errors(...)
17. │ │ └─base::withCallingHandlers(...)
18. │ └─vctrs::vec_as_location2(...)
19. │ ├─vctrs:::result_get(...) at vctrs/R/subscript-loc.R:160:3
20. │ └─vctrs:::vec_as_location2_result(...) at vctrs/R/subscript-loc.R:160:3
21. │ ├─base::tryCatch(...) at vctrs/R/subscript-loc.R:277:3
22. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
23. │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
24. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
25. │ └─vctrs::vec_as_location(i, n, names = names, arg = arg, call = call) at vctrs/R/subscript-loc.R:277:3
26. └─vctrs (local) `<fn>`() at vctrs/R/subscript-loc.R:84:3
27. └─vctrs:::stop_subscript_oob(...)
28. └─vctrs:::stop_subscript(...) at vctrs/R/subscript-loc.R:503:3
29. └─rlang::abort(...) at vctrs/R/subscript.R:150:3
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [3s/4s] OK
- checking PDF version of manual ... [6s/8s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR