* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘cpss’ ...
** this is package ‘cpss’ version ‘0.0.3’
** package ‘cpss’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 21.1.7 (1)’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNQLhnd/R.INSTALLfa520188092bb/cpss/src'
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic   -c algos.cpp -o algos.o
algos.cpp:199:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  199 |             if (!arma::is_finite(all_seg(l + 1, t))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:202:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  202 |             if (!arma::is_finite(all_seg(t + 1, r))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:214:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  214 |     if (!arma::is_finite(tau_hat_all(k))) {
      |                ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:271:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  271 |             if (!arma::is_finite(all_seg(li + 1, ri))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:278:28: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  278 |                 if (!arma::is_finite(all_seg(li + 1, t))) {
      |                            ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:281:28: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  281 |                 if (!arma::is_finite(all_seg(t + 1, ri))) {
      |                            ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:296:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  296 |     if (!arma::is_finite(tau_hat_all(k))) {
      |                ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos.cpp:347:20: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  347 |         if (!arma::is_finite(all_seg(R_finite(i) + 1, ts))) {
      |                    ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
8 warnings generated.
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic   -c algos_custom.cpp -o algos_custom.o
algos_custom.cpp:88:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
   88 |             if (!arma::is_finite(all_seg(l + 1, t))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:91:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
   91 |             if (!arma::is_finite(all_seg(t + 1, r))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:103:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  103 |     if (!arma::is_finite(tau_hat_all(k))) {
      |                ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:157:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  157 |             if (!arma::is_finite(all_seg(li + 1, ri))) {
      |                        ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:164:28: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  164 |                 if (!arma::is_finite(all_seg(li + 1, t))) {
      |                            ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:167:28: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  167 |                 if (!arma::is_finite(all_seg(t + 1, ri))) {
      |                            ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:182:16: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  182 |     if (!arma::is_finite(tau_hat_all(k))) {
      |                ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
algos_custom.cpp:230:20: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
  230 |         if (!arma::is_finite(all_seg(R_finite(i) + 1, ts))) {
      |                    ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
  164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
      |   ^
8 warnings generated.
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic   -c utils.cpp -o utils.o
clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o cpss.so RcppExports.o algos.o algos_custom.o utils.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNQLhnd/R.INSTALLfa520188092bb/cpss/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNQLhnd/R.INSTALLfa520188092bb/cpss/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNQLhnd/R.INSTALLfa520188092bb/cpss/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-cpss/00new/cpss/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cpss)