* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘cmenet’ ...
** this is package ‘cmenet’ version ‘0.1.2’
** package ‘cmenet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 19.1.7 (7)’
using C++ compiler: ‘Debian clang version 19.1.7 (7)’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpllRtjk/R.INSTALL443b29bb6151/cmenet/src'
clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages]
   66 |         #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.")
      |                 ^
1 warning generated.
clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c cme.cpp -o cme.o
In file included from cme.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages]
   66 |         #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.")
      |                 ^
cme.cpp:307:11: warning: unused variable 'condind' [-Wunused-variable]
  307 |       int condind = 0; //index for condition
      |           ^~~~~~~
cme.cpp:653:13: warning: variable 'num_act' set but not used [-Wunused-but-set-variable]
  653 |         int num_act = 0;
      |             ^
cme.cpp:522:10: warning: unused variable 'cur_beta' [-Wunused-variable]
  522 |   double cur_beta = 0.0; //running beta
      |          ^~~~~~~~
cme.cpp:529:8: warning: unused variable 'kkt_bool' [-Wunused-variable]
  529 |   bool kkt_bool;
      |        ^~~~~~~~
cme.cpp:557:10: warning: unused variable 'inprod' [-Wunused-variable]
  557 |   double inprod = 0.0; //inner product
      |          ^~~~~~
cme.cpp:558:10: warning: unused variable 'thresh' [-Wunused-variable]
  558 |   double thresh = 0.0; //threshold for screening
      |          ^~~~~~
cme.cpp:559:7: warning: variable 'num_act' set but not used [-Wunused-but-set-variable]
  559 |   int num_act = 0;
      |       ^
8 warnings generated.
clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c getModelMtx.cpp -o getModelMtx.o
clang-19 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-19 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o cmenet.so RcppExports.o cme.o getModelMtx.o init.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpllRtjk/R.INSTALL443b29bb6151/cmenet/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpllRtjk/R.INSTALL443b29bb6151/cmenet/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpllRtjk/R.INSTALL443b29bb6151/cmenet/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-cmenet/00new/cmenet/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cmenet)