* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘bigMap’ ...
** package ‘bigMap’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.6 (1)’
using C++14
make[1]: Entering directory '/tmp/RtmpBq5k5n/R.INSTALL3b55977243a82a/bigMap/src'
clang++-18 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c RcppExports.cpp -o RcppExports.o
clang++-18 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c tsne.cpp -o tsne.o
tsne.cpp:270:8: warning: unused variable 'ij' [-Wunused-variable]
  270 |                         int ij = tIdx(n, i, j);
      |                             ^~
1 warning generated.
clang++-18 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c wtt.cpp -o wtt.o
clang++-18 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c zBeta.cpp -o zBeta.o
clang++-18 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c zTSNE.cpp -o zTSNE.o
clang++-18 -std=gnu++14 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o bigMap.so RcppExports.o tsne.o wtt.o zBeta.o zTSNE.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpBq5k5n/R.INSTALL3b55977243a82a/bigMap/src'
make[1]: Entering directory '/tmp/RtmpBq5k5n/R.INSTALL3b55977243a82a/bigMap/src'
make[1]: Leaving directory '/tmp/RtmpBq5k5n/R.INSTALL3b55977243a82a/bigMap/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-bigMap/00new/bigMap/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘bigMap’ as ‘bigMap_2.3.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (bigMap)