- using R Under development (unstable) (2024-12-04 r87420)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.4 (1)
Debian flang-new version 19.1.4 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘backbone/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘backbone’ version ‘2.1.4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘backbone’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘Debian clang version 19.1.4 (1)’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/15s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
backbone.suggest.Rd: Matrix, igraph
disparity.Rd: Matrix, igraph
fdsm.Rd: Matrix, igraph
fixedcol.Rd: Matrix, igraph
fixedfill.Rd: Matrix, igraph
fixedrow.Rd: Matrix, igraph
global.Rd: Matrix, igraph
lans.Rd: Matrix, igraph
mlf.Rd: Matrix, igraph
osdsm.Rd: Matrix, igraph
sdsm.Rd: Matrix, igraph
sparsify.Rd: Matrix, igraph
sparsify.with.geometric.Rd: Matrix, igraph
sparsify.with.gspar.Rd: Matrix, igraph
sparsify.with.hypergeometric.Rd: Matrix, igraph
sparsify.with.jaccard.Rd: Matrix, igraph
sparsify.with.localdegree.Rd: Matrix, igraph
sparsify.with.lspar.Rd: Matrix, igraph
sparsify.with.meetmin.Rd: Matrix, igraph
sparsify.with.quadrilateral.Rd: Matrix, igraph
sparsify.with.simmelian.Rd: Matrix, igraph
sparsify.with.skeleton.Rd: Matrix, igraph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [7s/8s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [3s/4s] OK
Running ‘tinytest.R’ [3s/4s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [7s/10s] OK
- checking PDF version of manual ... [7s/10s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE