* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/acebayes.Rcheck’ * using R Under development (unstable) (2025-07-13 r88407) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3+b1) Debian flang-new version 19.1.7 (3+b1) * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘acebayes/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘acebayes’ version ‘1.10’ * checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Antony M. Overstall ’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = c("Antony", "M."), family = "Overstall", role = c("aut", "cre"), email = "a.m.overstall@soton.ac.uk"), person(given = c("David", "C."), family = "Woods", role = "aut"), person(given = c("Maria", "Adamou", "&", "Damianos"), family = "Michaelides", role = "aut")) as necessary. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘acebayes’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/acebayes-00install.html' for details. * used C compiler: ‘Debian clang version 19.1.7 (3+b1)’ * used C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’ * checking C++ specification ... NOTE Specified C++11: please drop specification unless essential * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/1s] OK * checking whether the package can be unloaded cleanly ... [0s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK * checking whether the namespace can be unloaded cleanly ... [0s/1s] OK * checking loading without being on the library search path ... [0s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [14s/18s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) overstallwoods.Rd:184-185: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) overstallwoods.Rd:186-187: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) overstallwoods.Rd:188-189: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) overstallwoods.Rd:190-191: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking R/sysdata.rda ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [27s/13s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed aceglm 11.72 0.538 6.069 acebayes-package 6.61 0.314 2.613 Examples with CPU time > 2.5 times elapsed time user system elapsed ratio acebayes-package 6.61 0.314 2.613 2.65 * checking PDF version of manual ... [5s/7s] OK * checking HTML version of manual ... [2s/3s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 3 NOTEs