* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘SNPassoc’ ...
** this is package ‘SNPassoc’ version ‘2.3.1’
** package ‘SNPassoc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 21.1.8 (3+b1)’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4m6BIL/R.INSTALL31ae65200b186d/SNPassoc/src'
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c SNPassoc_init.c -o SNPassoc_init.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c groupsum.c -o groupsum.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c haplo_em_pin.c -o haplo_em_pin.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c louis_info.c -o louis_info.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c seqhap.c -o seqhap.o
clang-21 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o SNPassoc.so SNPassoc_init.o groupsum.o haplo_em_pin.o louis_info.o seqhap.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4m6BIL/R.INSTALL31ae65200b186d/SNPassoc/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4m6BIL/R.INSTALL31ae65200b186d/SNPassoc/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4m6BIL/R.INSTALL31ae65200b186d/SNPassoc/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-SNPassoc/00new/SNPassoc/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SNPassoc)