* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘ProFAST’ ...
** package ‘ProFAST’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.5 (3)’
make[1]: Entering directory '/tmp/RtmpfLVPn9/R.INSTALL2ab5235c9d9e3f/ProFAST/src'
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c DR_removebatch.cpp -o DR_removebatch.o
DR_removebatch.cpp:15:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
   15 | #define INT_MIN (-INT_MAX - 1)
      |         ^
/usr/lib/llvm-18/lib/clang/18/include/limits.h:51:9: note: previous definition is here
   51 | #define INT_MIN   (-__INT_MAX__  -1)
      |         ^
DR_removebatch.cpp:432:7: warning: unused variable 'i' [-Wunused-variable]
  432 |   int i, iter, k, n;
      |       ^
2 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c RcppExports.cpp -o RcppExports.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c alignExp.cpp -o alignExp.o
alignExp.cpp:8:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
    8 | #define INT_MIN (-INT_MAX - 1)
      |         ^
/usr/lib/llvm-18/lib/clang/18/include/limits.h:51:9: note: previous definition is here
   51 | #define INT_MIN   (-__INT_MAX__  -1)
      |         ^
alignExp.cpp:180:7: warning: unused variable 'n' [-Wunused-variable]
  180 |   int n;
      |       ^
2 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c alignExps.cpp -o alignExps.o
alignExps.cpp:8:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
    8 | #define INT_MIN (-INT_MAX - 1)
      |         ^
/usr/lib/llvm-18/lib/clang/18/include/limits.h:51:9: note: previous definition is here
   51 | #define INT_MIN   (-__INT_MAX__  -1)
      |         ^
1 warning generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c cofast_util.cpp -o cofast_util.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  "-DARMA_64BIT_WORD=1" -fpic  -g -O3 -Wall -pedantic  -c profast.cpp -o profast.o
profast.cpp:14:9: warning: 'INT_MIN' macro redefined [-Wmacro-redefined]
   14 | #define INT_MIN (-INT_MAX - 1)
      |         ^
/usr/lib/llvm-18/lib/clang/18/include/limits.h:51:9: note: previous definition is here
   51 | #define INT_MIN   (-__INT_MAX__  -1)
      |         ^
profast.cpp:408:7: warning: variable 'n' set but not used [-Wunused-but-set-variable]
  408 |   int n;
      |       ^
2 warnings generated.
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o ProFAST.so DR_removebatch.o RcppExports.o alignExp.o alignExps.o cofast_util.o profast.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpfLVPn9/R.INSTALL2ab5235c9d9e3f/ProFAST/src'
make[1]: Entering directory '/tmp/RtmpfLVPn9/R.INSTALL2ab5235c9d9e3f/ProFAST/src'
make[1]: Leaving directory '/tmp/RtmpfLVPn9/R.INSTALL2ab5235c9d9e3f/ProFAST/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-ProFAST/00new/ProFAST/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘ProFAST’ as ‘ProFAST_1.4_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (ProFAST)