- using R Under development (unstable) (2025-07-15 r88411)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.7 (3+b1)
Debian flang-new version 19.1.7 (3+b1)
- running under: Debian GNU/Linux 13 (trixie)
- using session charset: UTF-8
- checking for file ‘PhotoGEA/DESCRIPTION’ ... OK
- this is package ‘PhotoGEA’ version ‘1.3.3’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [3s/5s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘PhotoGEA’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [27s/36s] OK
- checking Rd files ... [2s/4s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [150s/191s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
confidence_intervals_c3_aci 8.453 0.016 9.843
fit_c3_variable_j 7.962 0.185 9.883
confidence_intervals_c4_aci 7.428 0.004 10.552
fit_c3_aci 7.078 0.020 8.844
initial_guess_c3_variable_j 6.309 0.012 7.647
fit_c4_aci 5.360 0.011 7.119
calculate_c3_limitations_grassi 4.829 0.021 6.893
plot_c3_aci_fit 4.630 0.008 5.439
calculate_c3_limitations_warren 4.536 0.007 5.292
calculate_jmax 4.528 0.012 5.549
plot_c4_aci_fit 4.522 0.012 5.597
process_tdl_cycle_erml 4.414 0.012 6.834
initial_guess_c3_aci 4.348 0.015 5.433
initial_guess_c4_aci 4.246 0.012 5.700
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [196s/238s] OK
Running ‘testthat.R’ [196s/237s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [52s/65s] OK
- checking PDF version of manual ... [16s/21s] OK
- checking HTML version of manual ... [12s/18s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK