* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/NMsim.Rcheck’
* using R Under development (unstable) (2025-07-13 r88407)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (3+b1)
    Debian flang-new version 19.1.7 (3+b1)
* running under: Debian GNU/Linux 13 (trixie)
* using session charset: UTF-8
* checking for file ‘NMsim/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘NMsim’ version ‘0.2.3’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [2s/3s] OK
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package which this enhances but not available for checking: ‘simpar’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘NMsim’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/NMsim-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking whether startup messages can be suppressed ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [20s/26s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [5s/6s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [32s/40s] ERROR
  Running ‘testthat.R’ [32s/39s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(NMsim)
  NMsim 0.2.3. Browse NMsim documentation at
  https://NMautoverse.github.io/NMsim/
  > 
  > test_check("NMsim")
  [ FAIL 6 | WARN 0 | SKIP 0 | PASS 139 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test_NMcreateMatLines.R:66:9'): Full covariance matrix ────────────
  `res` has changed from known value recorded in 'testReference/NMcreateMatLines_03.rds'.
  5/5 mismatches
  x[1]: " BLOCK(5) FIX 0.00421346"
  y[1]: " BLOCK(5) FIX 0.00253814"
  
  x[2]: "0.00216572 0.00341787"
  y[2]: "0.00113554 0.00292987"
  
  x[3]: "-0.0026693 -0.00208163 0.0119622"
  y[3]: "-0.00157543 -0.000280481 0.0263268"
  
  x[4]: "0.00802184 0.00513707 -0.0243139 0.076761"
  y[4]: "0.0044503 0.00198917 -0.0579947 0.159833"
  
  x[5]: "0.00111323 0.000867854 -0.0048564 0.0174466 0.00596833"
  y[5]: "0.0012677 0.000341358 -0.0203661 0.0535258 0.0195262"
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(res, fileRef) at test_NMcreateMatLines.R:66:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_NMsim.R:295:9'): sizes ───────────────────────────────────────
  `mod` has changed from known value recorded in 'testReference/NMsim_sizes_05.rds'.
  Lengths differ: 67 is not 66
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim.R:295:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_NMsim.R:326:9'): inits - modify parameter ────────────────────
  `mod` has changed from known value recorded in 'testReference/NMsim_inits_06.rds'.
  Lengths differ: 70 is not 69
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim.R:326:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_NMsim_NWPRI.R:66:9'): NMsim_NWPRI ────────────────────────────
  mod$THETAPV has changed from known value recorded in 'testReference/NMsim_NWPRI_01_THETAPV.rds'.
  5/5 mismatches
  x[1]: "$THETAPV BLOCK(5) FIX 0.00421346"
  y[1]: "$THETAPV BLOCK(5) FIX 0.00253814"
  
  x[2]: "0.00216572 0.00341787"
  y[2]: "0.00113554 0.00292987"
  
  x[3]: "-0.0026693 -0.00208163 0.0119622"
  y[3]: "-0.00157543 -0.000280481 0.0263268"
  
  x[4]: "0.00802184 0.00513707 -0.0243139 0.076761"
  y[4]: "0.0044503 0.00198917 -0.0579947 0.159833"
  
  x[5]: "0.00111323 0.000867854 -0.0048564 0.0174466 0.00596833"
  y[5]: "0.0012677 0.000341358 -0.0203661 0.0535258 0.0195262"
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(...) at test_NMsim_NWPRI.R:66:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_NMsim_NWPRI.R:68:9'): NMsim_NWPRI ────────────────────────────
  `mod` has changed from known value recorded in 'testReference/NMsim_NWPRI_01.rds'.
  Component "THETAPV": 5 string mismatches
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(mod, fileRef) at test_NMsim_NWPRI.R:68:9
   2.   └─testthat::expect_known_value(..., update = update)
  ── Failure ('test_NMsim_VarCov.R:68:5'): Basic ─────────────────────────────────
  `mod` has changed from known value recorded in 'testReference/NMsim_VarCov_01a.rds'.
  Component "SIGMA": 1 string mismatch
  Backtrace:
      ▆
   1. └─testthat::expect_equal_to_reference(mod, fileRef_a) at test_NMsim_VarCov.R:68:5
   2.   └─testthat::expect_known_value(..., update = update)
  
  [ FAIL 6 | WARN 0 | SKIP 0 | PASS 139 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [6s/8s] OK
* checking HTML version of manual ... [2s/4s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 ERROR