• using R Under development (unstable) (2026-02-14 r89420)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 21.1.8 (3)     Debian flang version 21.1.8 (3)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-02-16 18:00:36 UTC
• checking for file ‘Momocs/DESCRIPTION’ ... OK
• this is package ‘Momocs’ version ‘1.5.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [3s/6s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘Momocs’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking whether startup messages can be suppressed ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [54s/68s] OK
• checking Rd files ... [3s/4s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [15s/19s] ERROR Running examples in ‘Momocs-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: PCcontrib > ### Title: Shape variation along PC axes > ### Aliases: PCcontrib PCcontrib.PCA > > ### ** Examples > > bot.p <- PCA(efourier(bot, 12)) 'norm=TRUE' is used and this may be troublesome. See ?efourier #Details > PCcontrib(bot.p, nax=1:3) Error: ! `mutate_()` was deprecated in dplyr 0.7.0 and is now defunct. ℹ Please use `mutate()` instead. ℹ See vignette('programming') for more help Backtrace:     ▆  1. ├─Momocs::PCcontrib(bot.p, nax = 1:3)  2. ├─Momocs:::PCcontrib.PCA(bot.p, nax = 1:3)  3. │ └─Momocs:::morphospace2PCA(x, xax = i, yax = 1, pos = pos.i)  4. │ └─dplyr::bind_cols(df_shp, df_trans) %>% ...  5. └─dplyr::mutate_(...)  6. └─dplyr:::lazy_defunct("mutate")  7. └─lifecycle::deprecate_stop(...)  8. └─lifecycle:::deprecate_stop0(msg)  9. └─rlang::cnd_signal(...) Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [6s/8s] OK   Running ‘testthat.R’ [6s/8s]
• checking PDF version of manual ... [28s/36s] OK
• checking HTML version of manual ... [33s/50s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR