- using R Under development (unstable) (2025-12-07 r89119)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 21.1.6 (2)
Debian flang version 21.1.6 (2)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘MiscMetabar/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘MiscMetabar’ version ‘0.14.4’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [3s/4s] OK
- checking package namespace information ... OK
- checking package dependencies ... INFO
Packages suggested but not available for checking:
'adespatial', 'gghalves', 'rotl'
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MiscMetabar’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [17s/22s] OK
- checking whether the package can be loaded with stated dependencies ... [16s/20s] OK
- checking whether the package can be unloaded cleanly ... [16s/21s] OK
- checking whether the namespace can be loaded with stated dependencies ... [17s/22s] OK
- checking whether the namespace can be unloaded cleanly ... [18s/26s] OK
- checking loading without being on the library search path ... [17s/24s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [91s/114s] OK
- checking Rd files ... [2s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [10s/11s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [146s/188s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
SRS_curve_pq 9.750 0.293 12.625
ggscatt_pq 6.943 0.041 8.610
tbl_sum_taxtable 6.708 0.027 8.034
plot_refseq_extremity_pq 6.407 0.225 8.723
psmelt_samples_pq 6.235 0.284 8.565
plot_complexity_pq 5.977 0.218 8.092
subset_taxa_tax_control 5.435 0.107 7.709
summary_plot_pq 5.375 0.126 7.199
tbl_sum_samdata 4.916 0.039 6.163
plot_refseq_pq 4.517 0.306 6.376
sankey_pq 4.518 0.222 6.999
hill_curves_pq 4.396 0.024 5.585
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [116s/76s] OK
Running ‘spelling.R’ [0s/0s]
Running ‘testthat.R’ [116s/75s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [23s/31s] OK
- checking PDF version of manual ... [13s/16s] OK
- checking HTML version of manual ... [15s/21s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK