- using R Under development (unstable) (2024-10-01 r87205)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.0 (4)
Debian flang-new version 19.1.0 (4)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘MethComp/DESCRIPTION’ ... OK
- this is package ‘MethComp’ version ‘1.30.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MethComp’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [15s/21s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) cardiac.Rd:15: Escaped LaTeX specials: \&
checkRd: (-1) plvol.Rd:14: Escaped LaTeX specials: \&
checkRd: (-1) sbp.Rd:16: Escaped LaTeX specials: \&
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
pairs.Rd: Lattice, xyplot, densityplot
trace.MCmcmc.Rd: Lattice
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [31s/46s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
sbp 6.191 0.056 9.026
sbp.MC 5.404 0.146 8.363
- checking PDF version of manual ... [7s/10s] OK
- checking HTML version of manual ... [3s/6s] NOTE
Found the following HTML validation problems:
BA.est.html:149:32 (BA.est.Rd:121): Warning: trimming empty <code>
- checking for non-standard things in the check directory ... OK
- DONE
Status: 3 NOTEs