• using R Under development (unstable) (2024-04-24 r86483)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 18.1.0 (rc4-1)     Debian flang-new version 18.1.0 (rc4-1)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘GauPro/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘GauPro’ version ‘0.2.11’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘GauPro’ can be installed ... WARNING Found the following significant warnings:   corr_cubic_matrix.cpp:28:20: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]   corr_cubic_matrix.cpp:64:21: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]   corr_cubic_matrix.cpp:99:18: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]   corr_cubic_matrix.cpp:156:23: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]   corr_cubic_matrix.cpp:177:23: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value] See the install log for details.
• used C compiler: ‘Debian clang version 18.1.0 (rc4-1)’
• used C++ compiler: ‘Debian clang version 18.1.0 (rc4-1)’
• checking C++ specification ... OK   Not all R platforms support C++17
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/17s] OK
• checking Rd files ... [4s/5s] NOTE checkRd: (-1) summary.GauPro.Rd:5-35: Lost braces      5 | \title{if (F) {        | ^ checkRd: (-1) summary.GauPro.Rd:20-22: Lost braces     20 | #' if (requireNamespace("MASS", quietly = TRUE)) {        | ^ checkRd: (-1) summary.GauPro.Rd:24-34: Lost braces     24 | plot.GauPro <- function(x, ...) {        | ^ checkRd: (-1) summary.GauPro.Rd:26-28: Lost braces     26 | # if (x$D == 1) {        | ^ checkRd: (-1) summary.GauPro.Rd:28-30: Lost braces     28 | # } else if (x$D == 2) {        | ^ checkRd: (-1) summary.GauPro.Rd:30-33: Lost braces     30 | # } else {        | ^ checkRd: (-1) summary.GauPro.Rd:49-79: Lost braces     49 | if (F) {        | ^ checkRd: (-1) summary.GauPro.Rd:64-66: Lost braces     64 | #' if (requireNamespace("MASS", quietly = TRUE)) {        | ^ checkRd: (-1) summary.GauPro.Rd:68-78: Lost braces     68 | plot.GauPro <- function(x, ...) {        | ^ checkRd: (-1) summary.GauPro.Rd:70-72: Lost braces     70 | # if (x$D == 1) {        | ^ checkRd: (-1) summary.GauPro.Rd:72-74: Lost braces     72 | # } else if (x$D == 2) {        | ^ checkRd: (-1) summary.GauPro.Rd:74-77: Lost braces     74 | # } else {        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [35s/42s] OK Examples with CPU (user + system) or elapsed time > 5s               user system elapsed FactorKernel 4.687 0.083 5.883 Cubic 4.204 0.067 5.296
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [238s/284s] ERROR   Running ‘testthat.R’ [238s/284s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(GauPro)   >   > test_check("GauPro")   Increasing nugget to get invertibility from 6.38557e-06 to 1.277114e-05   [ FAIL 1 | WARN 1 | SKIP 0 | PASS 3055 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test_kernel_model_and_kernels.R:1333:3'): Wide range Z ────────────   mean(abs((e1$Z - e1$pred(e1$X))/e1$Z)) is not strictly less than 0.1. Difference: 0.306      [ FAIL 1 | WARN 1 | SKIP 0 | PASS 3055 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [19s/26s] OK
• checking PDF version of manual ... [16s/20s] OK
• checking HTML version of manual ... [12s/17s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 1 WARNING, 1 NOTE