* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘ForceChoice’ ... ** this is package ‘ForceChoice’ version ‘1.0.1’ ** package ‘ForceChoice’ successfully unpacked and MD5 sums checked ** using staged installation Registered S3 methods overwritten by 'RcppEigen': method from predict.fastLm RcppArmadillo print.fastLm RcppArmadillo summary.fastLm RcppArmadillo print.summary.fastLm RcppArmadillo ** libs specified C++17 using C++ compiler: ‘Debian clang version 23.1.1 (2)’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3EJDcu/R.INSTALL4c0304cef172d/ForceChoice/src' clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c fcggum_istem_fast.cpp -o fcggum_istem_fast.o clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c gibbs_theta_fast.cpp -o gibbs_theta_fast.o In file included from gibbs_theta_fast.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from gibbs_theta_fast.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from gibbs_theta_fast.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from gibbs_theta_fast.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ gibbs_theta_fast.cpp:43:8: warning: unused function 'mirt_person_loglik' [-Wunused-function] 43 | double mirt_person_loglik(const double* x, int person, const MatrixXd& par, | ^~~~~~~~~~~~~~~~~~ gibbs_theta_fast.cpp:61:8: warning: unused function 'mgpcm_person_loglik' [-Wunused-function] 61 | double mgpcm_person_loglik(const double* x, int person, const MatrixXd& par, | ^~~~~~~~~~~~~~~~~~~ gibbs_theta_fast.cpp:79:8: warning: unused function 'mggum_person_loglik' [-Wunused-function] 79 | double mggum_person_loglik(const double* x, int person, const MatrixXd& par, | ^~~~~~~~~~~~~~~~~~~ gibbs_theta_fast.cpp:206:8: warning: unused function 'fcmirt_person_loglik' [-Wunused-function] 206 | double fcmirt_person_loglik(const double* x, int person, const MatrixXd& par, | ^~~~~~~~~~~~~~~~~~~~ gibbs_theta_fast.cpp:231:8: warning: unused function 'fcggum_person_loglik' [-Wunused-function] 231 | double fcggum_person_loglik(const double* x, int person, const MatrixXd& par, | ^~~~~~~~~~~~~~~~~~~~ 10 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c gibbs_tirt.cpp -o gibbs_tirt.o In file included from gibbs_tirt.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from gibbs_tirt.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from gibbs_tirt.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from gibbs_tirt.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ gibbs_tirt.cpp:26:8: warning: unused function 'tirt_person_loglik' [-Wunused-function] 26 | double tirt_person_loglik(const double* x, | ^~~~~~~~~~~~~~~~~~ 6 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c gof_fast.cpp -o gof_fast.o clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c item_loglik.cpp -o item_loglik.o clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c model_prob_fast.cpp -o model_prob_fast.o In file included from model_prob_fast.cpp:3: In file included from ./istem_gibbs_grid.h:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from model_prob_fast.cpp:3: In file included from ./istem_gibbs_grid.h:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from model_prob_fast.cpp:3: In file included from ./istem_gibbs_grid.h:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from model_prob_fast.cpp:3: In file included from ./istem_gibbs_grid.h:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ model_prob_fast.cpp:346:18: warning: unused variable 'kFcdcmLogFloor' [-Wunused-const-variable] 346 | constexpr double kFcdcmLogFloor = -27.631021115928547; // log(1e-12) | ^~~~~~~~~~~~~~ model_prob_fast.cpp:560:8: warning: unused function 'fcdcm_log_alpha_row' [-Wunused-function] 560 | double fcdcm_log_alpha_row(double theta, | ^~~~~~~~~~~~~~~~~~~ 7 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_FCDCM.cc -o stanExports_FCDCM.o In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ In file included from stanExports_FCDCM.cc:5: ./stanExports_FCDCM.h:418:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable] 418 | int pos__ = std::numeric_limits::min(); | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:19: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, int, double, nullptr, nullptr, nullptr>' requested here 403 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const int &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_FCDCM.h:857:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, true, int, double, stan::math::var_value, int>' requested here 857 | in__.template read_constrain_lub< | ^ ./stanExports_FCDCM.h:1375:12: note: in instantiation of function template specialization 'model_FCDCM_namespace::model_FCDCM::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1375 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_FCDCM_namespace::model_FCDCM::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 49 | std::vector cont_vector = util::initialize( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here 481 | return_code = stan::services::diagnose::diagnose(model, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_FCDCM.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:23: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:37: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:406:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, int, double, nullptr, nullptr, nullptr>' requested here 406 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const int &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_FCDCM.h:857:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, false, int, double, stan::math::var_value, int>' requested here 857 | in__.template read_constrain_lub< | ^ ./stanExports_FCDCM.h:1375:12: note: in instantiation of function template specialization 'model_FCDCM_namespace::model_FCDCM::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1375 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_FCDCM_namespace::model_FCDCM::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 54 | cont_vector = util::initialize(model, init, rng, init_radius, false, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton' requested here 502 | = stan::services::optimize::newton(model, *init_context_ptr, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_FCDCM.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_FCDCM.cc:5: In file included from ./stanExports_FCDCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:41: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ 27 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_FCGDINA.cc -o stanExports_FCGDINA.o In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_FCGDINA.cc:5: In file included from ./stanExports_FCGDINA.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ In file included from stanExports_FCGDINA.cc:5: ./stanExports_FCGDINA.h:371:9: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 371 | int nrow = std::numeric_limits::min(); | ^ 23 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_FCGGUM.cc -o stanExports_FCGGUM.o In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_FCGGUM.cc:5: In file included from ./stanExports_FCGGUM.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ 22 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_FCMIRT.cc -o stanExports_FCMIRT.o In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:19: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 403 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_FCMIRT.h:1423:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, true, double, double, stan::math::var_value, int>' requested here 1423 | in__.template read_constrain_lub< | ^ ./stanExports_FCMIRT.h:2347:12: note: in instantiation of function template specialization 'model_FCMIRT_namespace::model_FCMIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 2347 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_FCMIRT_namespace::model_FCMIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 49 | std::vector cont_vector = util::initialize( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here 481 | return_code = stan::services::diagnose::diagnose(model, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_FCMIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:23: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:37: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:406:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 406 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_FCMIRT.h:1423:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, false, double, double, stan::math::var_value, int>' requested here 1423 | in__.template read_constrain_lub< | ^ ./stanExports_FCMIRT.h:2347:12: note: in instantiation of function template specialization 'model_FCMIRT_namespace::model_FCMIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 2347 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_FCMIRT_namespace::model_FCMIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 54 | cont_vector = util::initialize(model, init, rng, init_radius, false, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton' requested here 502 | = stan::services::optimize::newton(model, *init_context_ptr, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_FCMIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_FCMIRT.cc:5: In file included from ./stanExports_FCMIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:41: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ 26 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_MGGUM.cc -o stanExports_MGGUM.o In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_MGGUM.cc:5: In file included from ./stanExports_MGGUM.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ 22 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_MGPCM.cc -o stanExports_MGPCM.o In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_MGPCM.cc:5: In file included from ./stanExports_MGPCM.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ 22 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_MIRT.cc -o stanExports_MIRT.o In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:19: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, int, int, nullptr, nullptr, nullptr>' requested here 403 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const int &, const int &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_MIRT.h:782:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, true, int, int, stan::math::var_value, int>' requested here 782 | in__.template read_constrain_lub< | ^ ./stanExports_MIRT.h:1721:12: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1721 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 49 | std::vector cont_vector = util::initialize( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here 481 | return_code = stan::services::diagnose::diagnose(model, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_MIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:23: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:19: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 403 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_MIRT.h:786:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, true, double, double, stan::math::var_value, int>' requested here 786 | in__.template read_constrain_lub< | ^ ./stanExports_MIRT.h:1721:12: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1721 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 49 | std::vector cont_vector = util::initialize( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here 481 | return_code = stan::services::diagnose::diagnose(model, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_MIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:23: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:37: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:406:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, int, int, nullptr, nullptr, nullptr>' requested here 406 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const int &, const int &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_MIRT.h:782:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, false, int, int, stan::math::var_value, int>' requested here 782 | in__.template read_constrain_lub< | ^ ./stanExports_MIRT.h:1721:12: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1721 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 54 | cont_vector = util::initialize(model, init, rng, init_radius, false, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton' requested here 502 | = stan::services::optimize::newton(model, *init_context_ptr, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_MIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:41: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:37: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:406:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 406 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_MIRT.h:786:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, false, double, double, stan::math::var_value, int>' requested here 786 | in__.template read_constrain_lub< | ^ ./stanExports_MIRT.h:1721:12: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1721 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_MIRT_namespace::model_MIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 54 | cont_vector = util::initialize(model, init, rng, init_radius, false, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton' requested here 502 | = stan::services::optimize::newton(model, *init_context_ptr, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_MIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_MIRT.cc:5: In file included from ./stanExports_MIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:41: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ 30 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c stanExports_TIRT.cc -o stanExports_TIRT.o In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:33: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/16/../../../../include/c++/16/streambuf:756:7: note: hidden overloaded virtual function 'std::basic_streambuf::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 756 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:18: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob.hpp:290: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/prob/student_t_qf.hpp:74:32: warning: unused variable 'function' [-Wunused-variable] 74 | static constexpr const char* function = "student_t_qf"; | ^~~~~~~~ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:52:20: warning: unused variable 'p_val_flip' [-Wunused-variable] 52 | const double p_val_flip = p_val < 0.5 ? p_val : 1.0 - p_val; | ^~~~~~~~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/prob/student_t_qf.hpp:42:18: warning: unused variable 'sqrt_inv_ibeta_m1' [-Wunused-variable] 42 | const double sqrt_inv_ibeta_m1 = sqrt(inv(ibeta_arg) - 1.0); | ^~~~~~~~~~~~~~~~~ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:54: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:98:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 98 | int ret = 0; | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/model_header.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:7: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:520:22: warning: unused variable 'rows' [-Wunused-variable] 520 | const Eigen::Index rows = row_idx.ns_.size(); | ^~~~ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:521:22: warning: unused variable 'cols' [-Wunused-variable] 521 | const Eigen::Index cols = col_idx.ns_.size(); | ^~~~ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:19: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:403:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 403 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_TIRT.h:948:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, true, double, double, stan::math::var_value, int>' requested here 948 | in__.template read_constrain_lub< | ^ ./stanExports_TIRT.h:1700:12: note: in instantiation of function template specialization 'model_TIRT_namespace::model_TIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1700 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_TIRT_namespace::model_TIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 49 | std::vector cont_vector = util::initialize( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here 481 | return_code = stan::services::diagnose::diagnose(model, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_TIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:215:23: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 215 | [arena_x, ub, lb, ret, lp, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:37: warning: lambda capture 'ub' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/constraint/lub_constrain.hpp:406:12: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, double, double, nullptr, nullptr, nullptr>' requested here 406 | return lub_constrain(std::forward(x), std::forward(lb), | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/deserializer.hpp:434:24: note: in instantiation of function template specialization 'stan::math::lub_constrain, -1, 1>>, const double &, const double &, stan::math::var_value, nullptr>' requested here 434 | return stan::math::lub_constrain(this->read(sizes...), lb, | ^ ./stanExports_TIRT.h:948:23: note: in instantiation of function template specialization 'stan::io::deserializer>::read_constrain_lub, -1, 1>, false, double, double, stan::math::var_value, int>' requested here 948 | in__.template read_constrain_lub< | ^ ./stanExports_TIRT.h:1700:12: note: in instantiation of function template specialization 'model_TIRT_namespace::model_TIRT::log_prob_impl>, std::vector, nullptr, nullptr, nullptr>' requested here 1700 | return log_prob_impl(params_r, params_i, pstream); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_TIRT_namespace::model_TIRT::log_prob>' requested here 40 | var adLogProb = model.template log_prob( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/util/initialize.hpp:169:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here 169 | log_prob = stan::model::log_prob_grad( | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/optimize/newton.hpp:54:25: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here 54 | cont_vector = util::initialize(model, init, rng, init_radius, false, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:502:35: note: in instantiation of function template specialization 'stan::services::optimize::newton' requested here 502 | = stan::services::optimize::newton(model, *init_context_ptr, | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here 1215 | ret = command(args, model_, holder, names_oi_tidx_, | ^ stanExports_TIRT.cc:15:73: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here 15 | .method("call_sampler", &rstan::stan_fit ::call_sampler) | ^ In file included from stanExports_TIRT.cc:5: In file included from ./stanExports_TIRT.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:49: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev.hpp:11: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint.hpp:14: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/rev/constraint/lub_constrain.hpp:170:41: warning: lambda capture 'lb' is not used [-Wunused-lambda-capture] 170 | reverse_pass_callback([arena_x, ub, lb, ret, diff, inv_logit_x]() mutable { | ^ 26 warnings generated. clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW -fpic -g -O3 -Wall -pedantic -c tools_fast.cpp -o tools_fast.o clang++-23 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o ForceChoice.so RcppExports.o fcggum_istem_fast.o gibbs_theta_fast.o gibbs_tirt.o gof_fast.o item_loglik.o model_prob_fast.o stanExports_FCDCM.o stanExports_FCGDINA.o stanExports_FCGGUM.o stanExports_FCMIRT.o stanExports_MGGUM.o stanExports_MGPCM.o stanExports_MIRT.o stanExports_TIRT.o tools_fast.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/ -Wl,-rpath,/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/ -ltbb -ltbbmalloc -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3EJDcu/R.INSTALL4c0304cef172d/ForceChoice/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3EJDcu/R.INSTALL4c0304cef172d/ForceChoice/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3EJDcu/R.INSTALL4c0304cef172d/ForceChoice/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-ForceChoice/00new/ForceChoice/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ForceChoice)