• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 21.1.7 (1)     Debian flang version 21.1.7 (1)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘FORD/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘FORD’ version ‘0.1.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [0s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘FORD’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [286s/359s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘ford-demo.Rmd’ using knitr Quitting from ford-demo.Rmd:63-66 [foci-result1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 2/2 in VECTOR_ELT --- Backtrace:     ▆  1. └─FOCI::foci(Y, X, numCores = 1)  2. └─FOCI:::foci_main(...)  3. └─parallel::mclapply(seq(1, p), estimateQFixedY, mc.cores = numCores)  4. └─base::lapply(X = X, FUN = FUN, ...)  5. └─FOCI (local) FUN(X[[i]], ...)  6. └─FOCI:::.estimateQ(Y, X[, id])  7. ├─df_X[, `:=`(rnn, .randomNN(id)), by = "group"]  8. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'ford-demo.Rmd' failed with diagnostics: attempt access index 2/2 in VECTOR_ELT --- failed re-building ‘ford-demo.Rmd’ --- re-building ‘indep_test.Rmd’ using knitr --- finished re-building ‘indep_test.Rmd’ --- re-building ‘irdc-demo.Rmd’ using knitr Quitting from irdc-demo.Rmd:79-90 [discrete-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 2/2 in VECTOR_ELT --- Backtrace:     ▆  1. └─FOCI::codec(y1, x1)  2. └─FOCI:::.estimateT(Y, Z)  3. └─FOCI:::.estimateQ(Y, X)  4. ├─df_X[, `:=`(rnn, .randomNN(id)), by = "group"]  5. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'irdc-demo.Rmd' failed with diagnostics: attempt access index 2/2 in VECTOR_ELT --- failed re-building ‘irdc-demo.Rmd’ SUMMARY: processing the following files failed:   ‘ford-demo.Rmd’ ‘irdc-demo.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR