- using R Under development (unstable) (2025-10-19 r88945)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.7 (7)
Debian flang-new version 19.1.7 (7)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘ENMeval/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘ENMeval’ version ‘2.0.5.2’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘ENMeval’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [9s/11s] OK
- checking whether the package can be loaded with stated dependencies ... [9s/10s] OK
- checking whether the package can be unloaded cleanly ... [9s/11s] OK
- checking whether the namespace can be loaded with stated dependencies ... [9s/12s] OK
- checking whether the namespace can be unloaded cleanly ... [9s/11s] OK
- checking loading without being on the library search path ... [9s/12s] OK
- checking whether startup messages can be suppressed ... [9s/12s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [46s/64s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [10s/12s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [11s/13s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [273s/331s] OK
Running ‘testthat.R’ [273s/331s]
- checking PDF version of manual ... [11s/16s] OK
- checking HTML version of manual ... [3s/5s] NOTE
Found the following HTML validation problems:
calc.10p.trainThresh.html:46:1 (calc.10p.trainThresh.Rd:10): Warning: missing </ul> before </div>
emp.bg.html:49:1 (emp.bg.Rd:13): Warning: missing </ul> before </div>
emp.bg.grp.html:49:1 (emp.bg.grp.Rd:13): Warning: missing </ul> before </div>
emp.occs.html:49:1 (emp.occs.Rd:13): Warning: missing </ul> before </div>
emp.occs.grp.html:49:1 (emp.occs.grp.Rd:13): Warning: missing </ul> before </div>
enm.args.html:58:1 (enm.args.Rd:21): Warning: missing </ul> before </div>
enm.errors.html:58:1 (enm.errors.Rd:21): Warning: missing </ul> before </div>
enm.fun.html:58:1 (enm.fun.Rd:21): Warning: missing </ul> before </div>
enm.msgs.html:58:1 (enm.msgs.Rd:21): Warning: missing </ul> before </div>
enm.name.html:58:1 (enm.name.Rd:21): Warning: missing </ul> before </div>
enm.ncoefs.html:58:1 (enm.ncoefs.Rd:21): Warning: missing </ul> before </div>
enm.predict.html:58:1 (enm.predict.Rd:21): Warning: missing </ul> before </div>
enm.variable.importance.html:58:1 (enm.variable.importance.Rd:21): Warning: missing </ul> before </div>
eval.algorithm.html:49:1 (eval.algorithm.Rd:13): Warning: missing </ul> before </div>
eval.bg.html:49:1 (eval.bg.Rd:13): Warning: missing </ul> before </div>
eval.bg.grp.html:49:1 (eval.bg.grp.Rd:13): Warning: missing </ul> before </div>
eval.clamp.directions.html:49:1 (eval.clamp.directions.Rd:13): Warning: missing </ul> before </div>
eval.doClamp.html:49:1 (eval.doClamp.Rd:13): Warning: missing </ul> before </div>
eval.models.html:52:1 (eval.models.Rd:16): Warning: missing </ul> before </div>
eval.occs.html:49:1 (eval.occs.Rd:13): Warning: missing </ul> before </div>
eval.occs.grp.html:49:1 (eval.occs.grp.Rd:13): Warning: missing </ul> before </div>
eval.occs.testing.html:49:1 (eval.occs.testing.Rd:13): Warning: missing </ul> before </div>
eval.other.settings.html:49:1 (eval.other.settings.Rd:13): Warning: missing </ul> before </div>
eval.overlap.html:49:1 (eval.overlap.Rd:13): Warning: missing </ul> before </div>
eval.partition.method.html:49:1 (eval.partition.method.Rd:13): Warning: missing </ul> before </div>
eval.partition.settings.html:49:1 (eval.partition.settings.Rd:13): Warning: missing </ul> before </div>
eval.predictions.html:49:1 (eval.predictions.Rd:13): Warning: missing </ul> before </div>
eval.results.html:49:1 (eval.results.Rd:13): Warning: missing </ul> before </div>
eval.results.partitions.html:49:1 (eval.results.partitions.Rd:13): Warning: missing </ul> before </div>
eval.rmm.html:49:1 (eval.rmm.Rd:13): Warning: missing </ul> before </div>
eval.taxon.name.html:49:1 (eval.taxon.name.Rd:13): Warning: missing </ul> before </div>
eval.tune.settings.html:49:1 (eval.tune.settings.Rd:13): Warning: missing </ul> before </div>
eval.variable.importance.html:46:1 (eval.variable.importance.Rd:10): Warning: missing </ul> before </div>
loadENMevaluation.html:49:1 (loadENMevaluation.Rd:10): Warning: missing </ul> before </div>
lookup.enm.html:46:1 (lookup.enm.Rd:10): Warning: missing </ul> before </div>
maxnet.predictRaster.html:66:1 (maxnet.predictRaster.Rd:19): Warning: missing </ul> before </div>
null.algorithm.html:49:1 (null.algorithm.Rd:13): Warning: missing </ul> before </div>
null.doClamp.html:49:1 (null.doClamp.Rd:13): Warning: missing </ul> before </div>
null.emp.results.html:49:1 (null.emp.results.Rd:13): Warning: missing </ul> before </div>
null.mod.settings.html:49:1 (null.mod.settings.Rd:13): Warning: missing </ul> before </div>
null.no.iter.html:49:1 (null.no.iter.Rd:13): Warning: missing </ul> before </div>
null.other.settings.html:49:1 (null.other.settings.Rd:13): Warning: missing </ul> before </div>
null.partition.method.html:49:1 (null.partition.method.Rd:13): Warning: missing </ul> before </div>
null.partition.settings.html:49:1 (null.partition.settings.Rd:13): Warning: missing </ul> before </div>
null.results.html:49:1 (null.results.Rd:13): Warning: missing </ul> before </div>
null.results.partitions.html:49:1 (null.results.partitions.Rd:13): Warning: missing </ul> before </div>
saveENMevaluation.html:53:1 (saveENMevaluation.Rd:12): Warning: missing </ul> before </div>
tune.enm.html:225:1 (tune.enm.Rd:138): Warning: missing </ul> before </div>
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE