- using R Under development (unstable) (2025-11-23 r89052)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 21.1.5 (1)
Debian flang version 21.1.5 (1)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘EDISON/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘EDISON’ version ‘1.1.1’
- checking CRAN incoming feasibility ... [1s/1s] NOTE
Maintainer: ‘Frank Dondelinger <fdondelinger.work@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Frank",
family = "Dondelinger",
role = c("aut", "cre"),
email = "fdondelinger.work@gmail.com"),
person(given = "Sophie",
family = "Lebre",
role = "aut"))
as necessary.
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘EDISON’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [12s/16s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [7s/8s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/9s] ERROR
Running ‘test-all.R’ [6s/9s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
> library(testthat)
> test_check("EDISON")
Loading required package: EDISON
Loading required package: corpcor
Loading required package: MASS
[1] "Initialisation successful."
[1] "Starting tvDBN iterations..."
5 % 10 % 15 % 20 % 25 % 30 % 35 % 40 % 45 % 50 % 55 % 60 % 65 % 70 % 75 % 80 % 85 % 90 % 95 % 100 % [1] ""
[1] "End of iterations"
[1] "Initialisation successful."
[1] "Starting tvDBN iterations..."
5 % 10 % 15 % 20 % 25 % 30 % 35 % 40 % 45 % 50 % 55 % 60 % 65 % 70 % 75 % 80 % 85 % 90 % 95 % 100 % [1] ""
[1] "End of iterations"
Saving _problems/test-structure-moves-329.R
Saving _problems/test-structure-moves-333.R
Saving _problems/test-structure-moves-337.R
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 17 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-structure-moves.r:328:1'): network info the same before and after ──
Error in `is_true()`: could not find function "is_true"
Backtrace:
▆
1. └─testthat::expect_that(updateCorrectly(), is_true())
── Error ('test-structure-moves.r:332:1'): rejected moves make no change ───────
Error in `is_true()`: could not find function "is_true"
Backtrace:
▆
1. └─testthat::expect_that(noChangeOnReject(), is_true())
── Error ('test-structure-moves.r:336:1'): output not null ─────────────────────
Error in `is_false()`: could not find function "is_false"
Backtrace:
▆
1. └─testthat::expect_that(...)
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 17 ]
Error:
! Test failures.
Execution halted
- checking PDF version of manual ... [8s/10s] OK
- checking HTML version of manual ... [5s/7s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR, 1 NOTE