* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘DynamicGP’ ...
** package ‘DynamicGP’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 18.1.4 (1)’
using Fortran compiler: ‘Debian flang-new version 18.1.4 (1)’
using C++ compiler: ‘Debian clang version 18.1.4 (1)’
make[1]: Entering directory '/tmp/Rtmpj6GxsB/R.INSTALLba62830c591c5/DynamicGP/src'
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c covar_sep.c -o covar_sep.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c cpputil.cpp -o cpputil.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c exceptions.cpp -o exceptions.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c gp_sep.cpp -o gp_sep.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c gpsepWraper.cpp -o gpsepWraper.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c gpseplm.cpp -o gpseplm.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c gpseplmWraper.cpp -o gpseplmWraper.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c lasvdgp.cpp -o lasvdgp.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c lasvdgpms.cpp -o lasvdgpms.o
flang-new-18 -fpic -g -O2 -c lautil.f -o lautil.o
./lautil.f:44:7: warning: Reference to the procedure 'dgeqrf' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes
call dgeqrf(n,n,A,n,work,work,lwork,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lautil.f:25:7: previous reference to 'dgeqrf'
call dgeqrf(n,n,A,lda,tau,work,wsiz,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
flang-new-18 -fpic -g -O2 -c lbfgsb.f -o lbfgsb.o
./lbfgsb.f:1625:10: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes
call dscal(col,theta,p(col+1),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:954:10: previous reference to 'dscal'
call dscal(n,stp,d,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2151:16: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(m-jy,wn1(jy+1,jy+1),1,wn1(jy,jy),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2152:16: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(m-jy,wn1(js+1,js+1),1,wn1(js,js),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2153:16: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(m-1,wn1(m+2,jy+1),1,wn1(m+1,jy),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2314:7: warning: Reference to the procedure 'dpofa' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object shapes
call dpofa(wn(col+1,col+1),m2,col,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2291:7: previous reference to 'dpofa'
call dpofa(wn,m2,col,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2810:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes
call dcopy(n,d,1,ws(1,itail),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2811:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes
call dcopy(n,r,1,wy(1,itail),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2824:13: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(j,ss(2,j+1),1,ss(1,j),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:2825:13: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(col-j,sy(j+1,j+1),1,sy(j,j),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:702:10: previous reference to 'dcopy'
call dcopy(n,x,1,z,1)
^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:3495:7: warning: Reference to the procedure 'dtrsl' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes
call dtrsl(wn,m2,col2,wv,11,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:1289:7: previous reference to 'dtrsl'
call dtrsl(wt,m,col,p(col+1),11,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:3500:7: warning: Reference to the procedure 'dtrsl' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes
call dtrsl(wn,m2,col2,wv,01,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lbfgsb.f:1289:7: previous reference to 'dtrsl'
call dtrsl(wt,m,col,p(col+1),11,info)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c lbfgsb_c.c -o lbfgsb_c.o
flang-new-18 -fpic -g -O2 -c limhpar.f -o limhpar.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c linalg.c -o linalg.o
flang-new-18 -fpic -g -O2 -c liqrev.f -o liqrev.o
./liqrev.f:87:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy(n,b,1,x,1)
^^^^^^^^^^^^^^^^^^^^^
./liqrev.f:84:10: previous reference to 'dcopy'
call dcopy(n-j+1,r(j,j),ldr,r(j,j),1)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
flang-new-18 -fpic -g -O2 -c liqrup.f -o liqrup.o
flang-new-18 -fpic -g -O2 -c lirslv.f -o lirslv.o
./lirslv.f:73:17: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes
call dcopy (n-k+1,R(k,k),1,R(k,k),ldr)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./lirslv.f:55:11: previous reference to 'dcopy'
call dcopy(n,qtf,1,dn,1)
^^^^^^^^^^^^^^^^^^^^^^^^
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c matrix.c -o matrix.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c maximinLHS.c -o maximinLHS.o
flang-new-18 -fpic -g -O2 -c mydgemv.f -o mydgemv.o
flang-new-18 -fpic -g -O2 -c mydtrmv.f -o mydtrmv.o
flang-new-18 -fpic -g -O2 -c mydtrsv.f -o mydtrsv.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c nleqslv.c -o nleqslv.o
flang-new-18 -fpic -g -O2 -c nwbjac.f -o nwbjac.o
flang-new-18 -fpic -g -O2 -c nwbrdn.f -o nwbrdn.o
flang-new-18 -fpic -g -O2 -c nwclsh.f -o nwclsh.o
flang-new-18 -fpic -g -O2 -c nwddlg.f -o nwddlg.o
flang-new-18 -fpic -g -O2 -c nwglsh.f -o nwglsh.o
flang-new-18 -fpic -g -O2 -c nwmhlm.f -o nwmhlm.o
flang-new-18 -fpic -g -O2 -c nwnjac.f -o nwnjac.o
flang-new-18 -fpic -g -O2 -c nwnleq.f -o nwnleq.o
flang-new-18 -fpic -g -O2 -c nwnwtn.f -o nwnwtn.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c nwout.c -o nwout.o
flang-new-18 -fpic -g -O2 -c nwpdlg.f -o nwpdlg.o
flang-new-18 -fpic -g -O2 -c nwpure.f -o nwpure.o
flang-new-18 -fpic -g -O2 -c nwqlsh.f -o nwqlsh.o
flang-new-18 -fpic -g -O2 -c nwtrup.f -o nwtrup.o
flang-new-18 -fpic -g -O2 -c nwutil.f -o nwutil.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c oeiinfo.c -o oeiinfo.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c random.c -o random.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c registration.c -o registration.o
flang-new-18 -fpic -g -O2 -c sdblepr.f -o sdblepr.o
flang-new-18 -fpic -g -O2 -c timer.f -o timer.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c util.c -o util.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude -fpic -g -O3 -Wall -pedantic -c utilWraper.c -o utilWraper.o
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o DynamicGP.so covar_sep.o cpputil.o exceptions.o gp_sep.o gpsepWraper.o gpseplm.o gpseplmWraper.o lasvdgp.o lasvdgpms.o lautil.o lbfgsb.o lbfgsb_c.o limhpar.o linalg.o liqrev.o liqrup.o lirslv.o matrix.o maximinLHS.o mydgemv.o mydtrmv.o mydtrsv.o nleqslv.o nwbjac.o nwbrdn.o nwclsh.o nwddlg.o nwglsh.o nwmhlm.o nwnjac.o nwnleq.o nwnwtn.o nwout.o nwpdlg.o nwpure.o nwqlsh.o nwtrup.o nwutil.o oeiinfo.o random.o registration.o sdblepr.o timer.o util.o utilWraper.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpj6GxsB/R.INSTALLba62830c591c5/DynamicGP/src'
make[1]: Entering directory '/tmp/Rtmpj6GxsB/R.INSTALLba62830c591c5/DynamicGP/src'
make[1]: Leaving directory '/tmp/Rtmpj6GxsB/R.INSTALLba62830c591c5/DynamicGP/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-DynamicGP/00new/DynamicGP/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DynamicGP)