- using R Under development (unstable) (2024-09-28 r87201)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.0 (4)
Debian flang-new version 19.1.0 (4)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘DatabaseConnector/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘DatabaseConnector’ version ‘6.3.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘DatabaseConnector’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking whether startup messages can be suppressed ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [17s/20s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
computeDataHash.Rd: dbConnect
connect.Rd: dbConnect
createConnectionDetails.Rd: dbConnect
dbAppendTable-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbClearResult-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbClearResult-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbColumnInfo-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbColumnInfo-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbCreateTable-DatabaseConnectorConnection-method.Rd:
DBIConnection-class
dbDisconnect-DatabaseConnectorConnection-method.Rd:
DBIConnection-class
dbExecute-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbExistsTable-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbFetch-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbFetch-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbGetInfo-DatabaseConnectorConnection-method.Rd: DBIDriver-class,
DBIConnection-class, DBIResult-class, DBIObject-class
dbGetInfo-DatabaseConnectorDriver-method.Rd: DBIDriver-class,
DBIConnection-class, DBIResult-class, DBIObject-class
dbGetQuery-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbGetRowCount-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbGetRowCount-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbGetRowsAffected-DatabaseConnectorDbiResult-method.Rd:
DBIResult-class
dbGetRowsAffected-DatabaseConnectorJdbcResult-method.Rd:
DBIResult-class
dbGetStatement-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbGetStatement-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbHasCompleted-DatabaseConnectorDbiResult-method.Rd: DBIResult-class
dbHasCompleted-DatabaseConnectorJdbcResult-method.Rd: DBIResult-class
dbIsValid-DatabaseConnectorDbiConnection-method.Rd: DBIObject-class,
DBIDriver-class, DBIConnection-class, DBIResult-class
dbIsValid-DatabaseConnectorJdbcConnection-method.Rd: DBIObject-class,
DBIDriver-class, DBIConnection-class, DBIResult-class
dbListFields-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbListTables-DatabaseConnectorConnection-method.Rd:
DBIConnection-class
dbReadTable-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class
dbRemoveTable-DatabaseConnectorConnection-ANY-method.Rd:
DBIConnection-class
dbSendQuery-DatabaseConnectorDbiConnection-character-method.Rd:
DBIConnection-class, DBIResult-class
dbSendQuery-DatabaseConnectorJdbcConnection-character-method.Rd:
DBIConnection-class, DBIResult-class
dbSendStatement-DatabaseConnectorConnection-character-method.Rd:
DBIConnection-class, DBIResult-class
dbWriteTable-DatabaseConnectorConnection-ANY-method.Rd:
DBIConnection-class
dbms.Rd: dbConnect
disconnect.Rd: dbConnect
dropEmulatedTempTables.Rd: dbConnect
executeSql.Rd: dbConnect
existsTable.Rd: dbConnect
getTableNames.Rd: dbConnect
insertTable.Rd: dbConnect
lowLevelExecuteSql.Rd: dbConnect
lowLevelQuerySql.Rd: dbConnect
lowLevelQuerySqlToAndromeda.Rd: dbConnect
querySql.Rd: dbConnect
querySqlToAndromeda.Rd: dbConnect
renderTranslateExecuteSql.Rd: dbConnect
renderTranslateQueryApplyBatched.Rd: dbConnect
renderTranslateQuerySql.Rd: dbConnect
renderTranslateQuerySqlToAndromeda.Rd: dbConnect
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [3s/3s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [2s/3s] OK
Running ‘testthat.R’ [2s/2s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [20s/27s] OK
- checking PDF version of manual ... [9s/12s] OK
- checking HTML version of manual ... [5s/9s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE