• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 21.1.7 (1)     Debian flang version 21.1.7 (1)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘DImodelsVis/DESCRIPTION’ ... OK
• this is package ‘DImodelsVis’ version ‘1.0.4’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘DImodelsVis’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [4s/5s] OK
• checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the package can be unloaded cleanly ... [4s/5s] OK
• checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [4s/6s] OK
• checking loading without being on the library search path ... [4s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [31s/40s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [123s/157s] OK Examples with CPU (user + system) or elapsed time > 5s                                 user system elapsed model_diagnostics_plot 10.043 0.154 13.183 simplex_path 8.106 0.079 10.086 model_diagnostics 7.827 0.135 9.428 visualise_effects 7.655 0.058 10.109 simplex_path_plot 6.578 0.001 7.505 gradient_change_plot 6.370 0.140 8.381 model_selection 6.438 0.019 9.009 prediction_contributions 5.904 0.048 7.649 simplex_path_data 5.559 0.012 6.107 DImodelsVis-package 5.013 0.278 6.841 gradient_change 5.032 0.007 7.200 grouped_ternary 4.649 0.100 6.594 ternary_data 3.388 1.242 5.846 visualise_effects_plot 4.308 0.004 5.586 prediction_contributions_plot 3.981 0.000 5.084
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [123s/146s] ERROR   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [122s/145s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview   > # * https://testthat.r-lib.org/articles/special-files.html   >   > library(testthat)   > library(DImodelsVis)   >   > # Taken from ggside see github issue #141 on vdiffr   > if ((nzchar(Sys.getenv("CI")) ||   + !nzchar(Sys.getenv("NOT_CRAN"))) &&   + identical(Sys.getenv("VDIFFR_RUN_TESTS"), 'false')) {   + #if we are running tests remotely AND   + # we are opting out of using vdiffr   + # assigning a dummy function   +   + expect_doppelganger <- function(...) {   + testthat::skip("`VDIFFR_RUN_TESTS` set to false on this remote check")   + }   + } else {   + expect_doppelganger <- vdiffr::expect_doppelganger   + }   >   > test_check("DImodelsVis")   v Finished data preparation.   v Created all plots.   v Created all plots.   v Finished data preparation.   Saving _problems/test-Ternary-77.R   v Created plot.   v Created plot.   [ FAIL 1 | WARN 0 | SKIP 8 | PASS 315 ]      ══ Skipped tests (8) ═══════════════════════════════════════════════════════════   • On CRAN (8): 'test-ConditionalTernary.R:2:1', 'test-GradientChange.R:2:1',     'test-GroupedTernary.R:2:1', 'test-ModelDiagnostics.R:2:1',     'test-ModelSelection.R:2:1', 'test-PredictionContributions.R:2:1',     'test-SimplexPath.R:2:1', 'test-VisualiseEffects.R:2:1'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-Ternary.R:62:3'): Basic ternary works as expected ──────────────   Error in `geom_text_contour(skip = 0, breaks = breaks, label.placer = metR::label_placer_flattest(), size = 3.5, nudge_x = 0.015, nudge_y = 0.015)`: Problem while converting geom to grob.   i Error occurred in the 11th layer.   Caused by error in `[.data.table`:   ! attempt access index 20/20 in VECTOR_ELT   Backtrace:        ▆     1. ├─vdiffr::expect_doppelganger(...) at test-Ternary.R:62:3     2. │ └─vdiffr (local) writer(fig, testcase, title)     3. │ ├─vdiffr:::print_plot(plot, title)     4. │ └─vdiffr:::print_plot.default(plot, title)     5. │ ├─base::print(p)     6. │ └─base::print.default(p)     7. │ ├─methods (local) `<stndrdGn>`(`<ggmltplt>`)     8. │ └─ggfortify (local) `<stndrdGn>`(`<ggmltplt>`)     9. │ ├─base::print(object)    10. │ └─ggfortify:::print(object)    11. │ └─ggfortify (local) .local(x, ...)    12. │ ├─base::do.call(gridExtra::grid.arrange, args)    13. │ └─gridExtra (local) `<fn>`(`<ggplt2::>`, `<ggplt2::>`, ncol = 2L, nrow = 1L)    14. │ └─gridExtra::arrangeGrob(...)    15. │ └─base::lapply(grobs[toconv], ggplot2::ggplotGrob)    16. │ └─ggplot2 (local) FUN(X[[i]], ...)    17. │ ├─ggplot2::ggplot_gtable(ggplot_build(x))    18. │ └─ggplot2 (local) `ggplot_gtable.ggplot2::ggplot_built`(ggplot_build(x))    19. │ └─ggplot2:::by_layer(...)    20. │ ├─rlang::try_fetch(...)    21. │ │ ├─base::tryCatch(...)    22. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)    23. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])    24. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)    25. │ │ └─base::withCallingHandlers(...)    26. │ └─ggplot2 (local) f(l = layers[[i]], d = data[[i]])    27. │ └─l$draw_geom(d, layout)    28. │ └─ggplot2 (local) draw_geom(..., self = self)    29. │ └─self$geom$draw_layer(...)    30. │ └─ggplot2 (local) draw_layer(..., self = self)    31. │ └─base::lapply(...)    32. │ └─ggplot2 (local) FUN(X[[i]], ...)    33. │ ├─rlang::inject(self$draw_panel(data, panel_params, coord, !!!params))    34. │ └─self$draw_panel(...)    35. │ └─metR (local) draw_panel(...)    36. │ ├─data[, `:=`(N, .N), by = .(group, piece)]    37. │ └─data.table:::`[.data.table`(...)    38. └─base::.handleSimpleError(...)    39. └─rlang (local) h(simpleError(msg, call))    40. └─handlers[[1L]](cnd)    41. └─cli::cli_abort(...)    42. └─rlang::abort(...)      [ FAIL 1 | WARN 0 | SKIP 8 | PASS 315 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [156s/200s] OK
• checking PDF version of manual ... [10s/13s] OK
• checking HTML version of manual ... [6s/9s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR