- using R Under development (unstable) (2024-12-04 r87420)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.4 (1)
Debian flang-new version 19.1.4 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘CACIMAR/DESCRIPTION’ ... OK
- this is package ‘CACIMAR’ version ‘1.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘CACIMAR’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [8s/9s] OK
- checking whether the package can be loaded with stated dependencies ... [8s/8s] OK
- checking whether the package can be unloaded cleanly ... [8s/8s] OK
- checking whether the namespace can be loaded with stated dependencies ... [6s/7s] OK
- checking whether the namespace can be unloaded cleanly ... [8s/9s] OK
- checking loading without being on the library search path ... [8s/9s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [37s/45s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [2s/2s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [39s/50s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
Identify_ConservedMarkers 6.273 0.102 7.544
Identify_ConservedNetworks 5.095 0.017 5.971
Identify_ConservedCellTypes 4.647 0.007 6.158
Heatmap_Cor 4.269 0.107 5.278
Plot_MarkersHeatmap 3.481 0.000 5.036
Format_Markers_Frac 3.433 0.011 5.280
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [35s/44s] OK
Running ‘testthat.R’ [35s/43s]
- checking PDF version of manual ... [4s/7s] OK
- checking HTML version of manual ... [0s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK