* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘BayesRGMM’ ... ** this is package ‘BayesRGMM’ version ‘2.2’ ** package ‘BayesRGMM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3+b2)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp355srg/R.INSTALL3653f220f2066d/BayesRGMM/src' clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c CPREMs.cpp -o CPREMs.o In file included from CPREMs.cpp:11: In file included from ./CPREMs.h:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include/RcppDist.h:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ CPREMs.cpp:538:43: warning: variable 'ESS' set but not used [-Wunused-but-set-variable] 538 | double CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.; | ^ CPREMs.cpp:538:51: warning: variable 'GP' set but not used [-Wunused-but-set-variable] 538 | double CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.; | ^ 3 warnings generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c ProbitML.cpp -o ProbitML.o In file included from ProbitML.cpp:11: In file included from ./ProbitML.h:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include/RcppDist.h:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ ProbitML.cpp:377:48: warning: variable 'ESS' set but not used [-Wunused-but-set-variable] 377 | double pit, CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.; | ^ ProbitML.cpp:377:56: warning: variable 'GP' set but not used [-Wunused-but-set-variable] 377 | double pit, CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.; | ^ 3 warnings generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c ProbitML_ARMA_KB.cpp -o ProbitML_ARMA_KB.o In file included from ProbitML_ARMA_KB.cpp:11: In file included from ./ProbitML_ARMA_KB.h:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include/RcppDist.h:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ ProbitML_ARMA_KB.cpp:626:26: warning: variable 'ESS' set but not used [-Wunused-but-set-variable] 626 | double pit, CPO_tmp, ESS=0, GP=0, ESS_GP_tmp, RJ1, RJ2; | ^ ProbitML_ARMA_KB.cpp:626:33: warning: variable 'GP' set but not used [-Wunused-but-set-variable] 626 | double pit, CPO_tmp, ESS=0, GP=0, ESS_GP_tmp, RJ1, RJ2; | ^ 3 warnings generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ 1 warning generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c Utility.cpp -o Utility.o In file included from Utility.cpp:4: In file included from ./ProbitML.h:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include/RcppDist.h:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ 1 warning generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c tmvrnormGibbs_KJLEE.cpp -o tmvrnormGibbs_KJLEE.o In file included from tmvrnormGibbs_KJLEE.cpp:1: In file included from ./tmvrnormGibbs_KJLEE.h:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more. [-W#pragma-messages] 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ 1 warning generated. clang++-19 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o BayesRGMM.so CPREMs.o ProbitML.o ProbitML_ARMA_KB.o RcppExports.o Utility.o tmvrnormGibbs_KJLEE.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp355srg/R.INSTALL3653f220f2066d/BayesRGMM/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp355srg/R.INSTALL3653f220f2066d/BayesRGMM/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp355srg/R.INSTALL3653f220f2066d/BayesRGMM/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-BayesRGMM/00new/BayesRGMM/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BayesRGMM)