* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘BHSBVAR’ ... ** this is package ‘BHSBVAR’ version ‘3.1.2’ ** package ‘BHSBVAR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.7 (7)’ using C++ compiler: ‘Debian clang version 19.1.7 (7)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCZZul/R.INSTALL3e4bd6719dd405/BHSBVAR/src' clang-19 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c BHSBVAR-init.c -o BHSBVAR-init.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c BHSBVAR.cpp -o BHSBVAR.o BHSBVAR.cpp:86:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 86 | if (arma::is_finite(pA(i, j, 0))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:111:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 111 | if (arma::is_finite(pH(i, j, 0))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:138:13: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 138 | if (arma::is_finite(pdetA(0, 0, 0))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:202:18: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 202 | if ((arma::is_finite(pH(j, i, 0))) && (pH(j, i, 0) == 0.0) && (arma::is_finite(pH(j, i, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:202:76: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 202 | if ((arma::is_finite(pH(j, i, 0))) && (pH(j, i, 0) == 0.0) && (arma::is_finite(pH(j, i, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:229:19: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 229 | if (arma::is_finite(pA(j, i, 0))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:233:21: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 233 | if (arma::is_finite(pA(j, i, 1))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:281:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 281 | if ((arma::is_finite(pH(j, i, 0))) && (arma::is_finite(pH(j, i, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:281:56: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 281 | if ((arma::is_finite(pH(j, i, 0))) && (arma::is_finite(pH(j, i, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:302:36: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 302 | if ((sign_test == 0) && (arma::is_finite(pdetA(0, 0, 0))) && (arma::is_finite(pdetA(0, 0, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:302:73: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 302 | if ((sign_test == 0) && (arma::is_finite(pdetA(0, 0, 0))) && (arma::is_finite(pdetA(0, 0, 1)))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:368:21: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 368 | if (arma::is_finite(pA(j, i, 6))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:402:23: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 402 | if (arma::is_finite(pA(j, i, 6))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:521:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 521 | if (arma::is_finite(priors(i, j, 0))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ BHSBVAR.cpp:938:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations] 938 | if (arma::is_finite(pA(j, i, 6))) { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here 164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]] | ^ 15 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o BHSBVAR.so BHSBVAR-init.o BHSBVAR.o RcppExports.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCZZul/R.INSTALL3e4bd6719dd405/BHSBVAR/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCZZul/R.INSTALL3e4bd6719dd405/BHSBVAR/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCZZul/R.INSTALL3e4bd6719dd405/BHSBVAR/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-BHSBVAR/00new/BHSBVAR/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BHSBVAR)