'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
'LazyData' is specified without a 'data' directory
Error(s) in re-building vignettes:
  ...
--- re-building ‘rDNAse.Rnw’ using Sweave
Loading required package: rDNAse
Error: processing vignette 'rDNAse.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'rDNAse.tex' failed.
LaTeX errors:
! LaTeX Error: File `tablefootnote.sty' not found.

Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)

! Emergency stop.
<read *> 
         
l.6 \usepackage
               [utf8]{inputenc}^^M
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘rDNAse.Rnw’

SUMMARY: processing the following file failed:
  ‘rDNAse.Rnw’

Error: Vignette re-building failed.
Execution halted
'LazyData' is specified without a 'data' directory

Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  joint_ms_hess.Rd: psqn_hess
  joint_ms_opt.Rd: psqn
  joint_ms_profile.Rd: psqn
  joint_ms_start_val.Rd: psqn
  surv_term.Rd: Surv
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(VAJointSurv)
  Loading required package: survival
  > 
  > options(testthat.progress.max_fails = 1000)
  > test_check("VAJointSurv")
installed size is 23.9Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs  21.5Mb
installed size is 24.2Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs  21.9Mb
installed size is 26.2Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs  23.8Mb
installed size is 24.7Mb
  sub-directories of 1Mb or more:
    doc    2.2Mb
    libs  22.3Mb