Imports includes 24 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable.  Move as many as possible to Suggests and
use conditionally.
Error(s) in re-building vignettes:
--- re-building ‘introduction.Rmd’ using rmarkdown

Quitting from lines 96-97 [unnamed-chunk-9] (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
Failed to load DuckDB spatial extension.
--- failed re-building ‘introduction.Rmd’

SUMMARY: processing the following file failed:
  ‘introduction.Rmd’

Error: Vignette re-building failed.
Execution halted

Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  list_higher_taxo.Rd: taxize
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.

Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  VSURF.Rd: randomForest
  VSURF_interp.Rd: randomForest
  VSURF_pred.Rd: randomForest
  VSURF_thres.Rd: randomForest
  predict.VSURF.Rd: randomForest, predict.randomForest
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.

Running examples in ‘wikiprofiler-Ex.R’ failed
The error most likely occurred in:

> ### Name: wpplot
> ### Title: Input specific wikipathways ID to get an output in class of
> ###   wpplot.
> ### Aliases: wpplot
> 
> ### ** Examples
> 
> wpplot('WP63_117935') 
Warning in file(con, "r") :
  cannot open URL 'https://classic.wikipathways.org//index.php?title=Special:ShowError&error=DB+connection+error%3A+Can%27t+connect+to+local+MySQL+server+through+socket+%27%2Fvar%2Frun%2Fmysqld%2Fmysqld.sock%27+%28111%29+%28localhost%29': HTTP status was '500 Internal Server Error'
Error in file(con, "r") : 
  cannot open the connection to 'https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=svg&pwTitle=Pathway:WP63_117935'
Calls: wpplot ... eval -> <Anonymous> -> do.call -> <Anonymous> -> file
Execution halted
Running examples in ‘wikiprofiler-Ex.R’ failed
The error most likely occurred in:

> ### Name: wpplot
> ### Title: Input specific wikipathways ID to get an output in class of
> ###   wpplot.
> ### Aliases: wpplot
> 
> ### ** Examples
> 
> wpplot('WP63_117935') 
Warning in file(con, "r") :
  cannot open URL 'https://classic.wikipathways.org//index.php?title=Special:ShowError&error=DB+connection+error%3A+Can%27t+connect+to+local+MySQL+server+through+socket+%27%2Fvar%2Frun%2Fmysqld%2Fmysqld.sock%27+%28111%29+%28localhost%29': HTTP status was '500 Internal Server Error'
Error in file(con, "r") : 
  cannot open the connection to 'https://www.wikipathways.org//wpi/wpi.php?action=downloadFile&type=svg&pwTitle=Pathway:WP63_117935'
Calls: wpplot ... eval -> <Anonymous> -> do.call -> <Anonymous> -> file
Execution halted