- using R version 4.4.0 RC (2024-04-16 r86473)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.2.0-13) 13.2.0
GNU Fortran (Debian 13.2.0-13) 13.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘MiscMetabar/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘MiscMetabar’ version ‘0.7.10’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘MiscMetabar’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [19s/24s] OK
- checking whether the package can be loaded with stated dependencies ... [18s/25s] OK
- checking whether the package can be unloaded cleanly ... [18s/24s] OK
- checking whether the namespace can be loaded with stated dependencies ... [18s/24s] OK
- checking whether the namespace can be unloaded cleanly ... [19s/24s] OK
- checking loading without being on the library search path ... [18s/25s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [94s/111s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [11s/12s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [104s/121s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
SRS_curve_pq 16.213 0.498 19.422
subset_taxa_tax_control 6.460 0.241 7.522
LCBD_pq 6.315 0.319 8.454
filter_trim 6.116 0.296 7.924
sankey_pq 5.217 0.038 5.674
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [153s/109s] OK
Running ‘testthat.R’ [153s/108s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [29s/34s] OK
- checking PDF version of manual ... [12s/14s] OK
- checking HTML version of manual ... [7s/11s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK