- using R version 4.2.0 (2022-04-22)
- using platform: x86_64-apple-darwin17.0 (64-bit)
- using session charset: UTF-8
- checking for file ‘sf/DESCRIPTION’ ... OK
- this is package ‘sf’ version ‘1.0-14’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘sf’ can be installed ... [137s/134s] OK
See the install log for details.
- checking installed package size ... NOTE
installed size is 278.4Mb
sub-directories of 1Mb or more:
doc 1.7Mb
libs 272.1Mb
sqlite 1.5Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [12s/12s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [13s/13s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [75s/77s] OK
Running ‘aggregate.R’ [1s/1s]
Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.10.2, GDAL 3.4.2, PROJ 8.2.1; sf_use_s2() is TRUE
---
> Linking to GEOS 3.11.1, GDAL 3.6.2, PROJ 9.1.1; sf_use_s2() is TRUE
Running ‘cast.R’ [2s/2s]
Comparing ‘cast.Rout’ to ‘cast.Rout.save’ ... OK
Running ‘crs.R’ [1s/1s]
Comparing ‘crs.Rout’ to ‘crs.Rout.save’ ... OK
Running ‘dist.R’ [1s/1s]
Comparing ‘dist.Rout’ to ‘dist.Rout.save’ ... OK
Running ‘dplyr.R’ [3s/3s]
Comparing ‘dplyr.Rout’ to ‘dplyr.Rout.save’ ... OK
Running ‘empty.R’ [1s/1s]
Comparing ‘empty.Rout’ to ‘empty.Rout.save’ ... OK
Running ‘gdal_geom.R’ [2s/2s]
Comparing ‘gdal_geom.Rout’ to ‘gdal_geom.Rout.save’ ...277c277
< Bounding box: xmin: -39.65182 ymin: 10.91731 xmax: 21.97439 ymax: 61.16965
---
> Bounding box: xmin: -39.65182 ymin: 10.93649 xmax: 21.97439 ymax: 61.16965
Running ‘geos.R’ [17s/17s]
Comparing ‘geos.Rout’ to ‘geos.Rout.save’ ... OK
Running ‘graticule.R’ [2s/2s]
Comparing ‘graticule.Rout’ to ‘graticule.Rout.save’ ... OK
Running ‘grid.R’ [2s/2s]
Comparing ‘grid.Rout’ to ‘grid.Rout.save’ ... OK
Running ‘maps.R’ [2s/2s]
Comparing ‘maps.Rout’ to ‘maps.Rout.save’ ... OK
Running ‘plot.R’ [6s/6s]
Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
Running ‘read.R’ [2s/2s]
Comparing ‘read.Rout’ to ‘read.Rout.save’ ...47a48,84
> Driver: OSM
> Available layers:
> layer_name geometry_type features fields crs_name
> 1 points Point NA 10 WGS 84
> 2 lines Line String NA 10 WGS 84
> 3 multilinestrings Multi Line String NA 4 WGS 84
> 4 multipolygons Multi Polygon NA 25 WGS 84
> 5 other_relations Geometry Collection NA 4 WGS 84
> Driver: OSM
> Available layers:
> layer_name geometry_type features fields crs_name
> 1 points Point 0 10 WGS 84
> 2 lines Line String 0 10 WGS 84
> 3 multilinestrings Multi Line String 0 4 WGS 84
> 4 multipolygons Multi Polygon 3 25 WGS 84
> 5 other_relations Geometry Collection 0 4 WGS 84
> Simple feature collection with 3 features and 25 fields
> Geometry type: MULTIPOLYGON
> Dimension: XY
> Bounding box: xmin: -1.556254 ymin: 53.79519 xmax: -1.550716 ymax: 53.80341
> Geodetic CRS: WGS 84
> osm_id osm_way_id name type aeroway amenity admin_level barrier boundary
> 1 <NA> 263958111 <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> 2 <NA> 301461256 <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> 3 <NA> 462227487 <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> building craft geological historic land_area landuse leisure man_made
> 1 <NA> <NA> <NA> <NA> <NA> <NA> park <NA>
> 2 <NA> <NA> <NA> <NA> <NA> <NA> park <NA>
> 3 <NA> <NA> <NA> <NA> <NA> <NA> park <NA>
> military natural office place shop sport tourism other_tags
> 1 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> 2 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> 3 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
> geometry
> 1 MULTIPOLYGON (((-1.550719 5...
> 2 MULTIPOLYGON (((-1.555763 5...
> 3 MULTIPOLYGON (((-1.551502 5...
284a322,326
> Warning messages:
> 1: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, :
> GDAL Message 1: Field with same name (identifier) already exists in (PointTimeSeriesObservation). Skipping newer ones
> 2: In CPL_read_ogr(dsn, layer, query, as.character(options), quiet, :
> GDAL Message 1: Field with same name (name) already exists in (PointTimeSeriesObservation). Skipping newer ones
298,299c340
< `/Volumes/Builds/packages/high-sierra-x86_64/results/4.2/sf.Rcheck/tests/tst__.gpkg'
< using driver `GPKG'
---
> `/home/edzer/git/sf.Rcheck/tests/tst__.gpkg' using driver `GPKG'
318c359
< [1] "Avery" "Watauga" "Ashe" "Wilkes" "Alleghany"
---
> [1] "Watauga" "Ashe" "Wilkes" "Alleghany"
Running ‘roundtrip.R’ [2s/2s]
Comparing ‘roundtrip.Rout’ to ‘roundtrip.Rout.save’ ... OK
Running ‘s2.R’ [2s/2s]
Comparing ‘s2.Rout’ to ‘s2.Rout.save’ ... OK
Running ‘sample.R’ [1s/1s]
Comparing ‘sample.Rout’ to ‘sample.Rout.save’ ... OK
Running ‘sfc.R’ [8s/8s]
Comparing ‘sfc.Rout’ to ‘sfc.Rout.save’ ...335c335
< "3.10.2" "3.4.2" "8.2.1"
---
> "3.11.1" "3.6.2" "9.1.1"
825,827d824
< Warning message:
< In CPL_crs_from_input(x) :
< GDAL Message 1: +init=epsg:XXXX syntax is deprecated. It might return a CRS with a non-EPSG compliant axis order.
Running ‘sfg.R’ [1s/1s]
Comparing ‘sfg.Rout’ to ‘sfg.Rout.save’ ... OK
Running ‘spatstat.R’ [3s/3s]
Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ...113c113
< spatstat.geom 3.2-2
---
> spatstat.geom 3.2-1
137c137
< Error in check.1.real(scale) :
---
> Error in spatstat_fun(..., win = spatstat.geom::as.owin(x)) :
Running ‘stars.R’ [3s/3s]
Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...141,143c141,143
< from to offset delta refsys point values x/y
< x 1 461 -84.3239 0.0192484 NAD27 FALSE NULL [x]
< y 1 141 36.5896 -0.0192484 NAD27 FALSE NULL [y]
---
> from to offset delta refsys point x/y
> x 1 461 -84.3239 0.0192484 NAD27 FALSE [x]
> y 1 141 36.5896 -0.0192484 NAD27 FALSE [y]
Running ‘testthat.R’ [11s/11s]
Running ‘units.R’ [1s/1s]
Comparing ‘units.Rout’ to ‘units.Rout.save’ ... OK
Running ‘wkb.R’ [1s/1s]
Comparing ‘wkb.Rout’ to ‘wkb.Rout.save’ ... OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... [2s/3s] NONE
‘sf1.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf2.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf3.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf4.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf5.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf6.Rmd’ using ‘UTF-8’... [0s/0s] OK
‘sf7.Rmd’ using ‘UTF-8’... [0s/0s] OK
- checking re-building of vignette outputs ... [25s/29s] OK
- checking PDF version of manual ... OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '