- using R Under development (unstable) (2024-04-29 r86495)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 18.1.4 (1)
Debian flang-new version 18.1.4 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- using option ‘--no-vignettes’
- checking for file ‘hetGP/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘hetGP’ version ‘1.1.6’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘hetGP’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘Debian clang version 18.1.4 (1)’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [1s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [1s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [43s/50s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) mleHetGP.Rd:57: Lost braces; missing escapes or markup?
57 | Level \code{2} gives more details. Level {3} additionaly displays all details about initialization of hyperparameters.
| ^
checkRd: (-1) mleHetTP.Rd:61: Lost braces; missing escapes or markup?
61 | Level \code{2} gives more details. Level {3} additionaly displays all details about initialization of hyperparameters.
| ^
checkRd: (-1) mleHomTP.Rd:76: Lost braces; missing escapes or markup?
76 | \item \code{nit_opt}, \code{msg}: \code{counts} and {msg} returned by \code{\link[stats]{optim}}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [1s/1s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [75s/87s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
crit_cSUR 8.978 0.000 10.364
SIR 8.926 0.012 9.709
crit_tMSE 7.285 0.000 9.154
IMSPE_optim 6.779 0.014 7.669
crit_optim 5.399 0.000 6.864
update.hetTP 5.117 0.011 6.728
crit_ICU 5.007 0.004 5.419
crit_MEE 4.685 0.000 5.479
crit_MCU 4.538 0.000 5.348
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking running R code from vignettes ... SKIPPED
- checking re-building of vignette outputs ... SKIPPED
- checking PDF version of manual ... [9s/12s] OK
- checking HTML version of manual ... [5s/6s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE