Running ‘testthat.R’ [126s/78s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > if (requireNamespace("testthat", quietly = TRUE)) {
  +   library("checkmate")
  +   library("testthat")
  +   library("mlr3spatiotempcv")
  +   test_check("mlr3spatiotempcv")
  + }
  Loading required package: mlr3
  Starting 2 test processes
  [ FAIL 6 | WARN 0 | SKIP 23 | PASS 1197 ]
  
  ══ Skipped tests (23) ══════════════════════════════════════════════════════════
  • On CRAN (18): 'test-1-autoplot.R:40:3', 'test-1-autoplot.R:72:3',
    'test-1-autoplot.R:98:3', 'test-1-autoplot.R:130:3',
    'test-1-autoplot.R:157:3', 'test-1-autoplot.R:189:3',
    'test-1-autoplot.R:224:3', 'test-1-autoplot.R:257:3',
    'test-1-autoplot.R:268:3', 'test-1-autoplot.R:315:3',
    'test-1-autoplot.R:343:3', 'test-1-autoplot.R:377:3',
    'test-2-autoplot.R:129:3', 'test-2-autoplot.R:182:3',
    'test-2-autoplot.R:204:3', 'test-2-autoplot.R:246:3',
    'test-2-autoplot.R:300:3', 'test-autoplot_buffer.R:19:3'
  • On Linux (2): 'test-2-autoplot.R:8:3', 'test-2-autoplot.R:54:3'
  • empty test (1): 'test-helper-DataBackend.R:1:1'
  • raster cannot be loaded (1): 'test-mlr3pipelines-graph-integration.R:4:3'
  • skmeans cannot be loaded (1): 'test-mlr_sptcv_generic.R:70:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-ResamplingRepeatedSpCVKnndm.R:21:3'): folds can be printed ─────
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
       ▆
    1. ├─base::suppressMessages(suppressWarnings(rsp$instantiate(task))) at test-ResamplingRepeatedSpCVKnndm.R:21:3
    2. │ └─base::withCallingHandlers(...)
    3. ├─base::suppressWarnings(rsp$instantiate(task))
    4. │ └─base::withCallingHandlers(...)
    5. └─rsp$instantiate(task)
    6.   └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__instantiate(...)
    7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
    8.       └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__.sample(...)
    9.         └─mlr3misc::map(...)
   10.           └─base::lapply(.x, .f, ...)
   11.             └─mlr3spatiotempcv (local) FUN(X[[i]], ...)
  ── Error ('test-ResamplingRepeatedSpCVKnndm.R:31:3'): reps can be printed ──────
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
       ▆
    1. ├─base::suppressMessages(suppressWarnings(rsp$instantiate(task))) at test-ResamplingRepeatedSpCVKnndm.R:31:3
    2. │ └─base::withCallingHandlers(...)
    3. ├─base::suppressWarnings(rsp$instantiate(task))
    4. │ └─base::withCallingHandlers(...)
    5. └─rsp$instantiate(task)
    6.   └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__instantiate(...)
    7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
    8.       └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__.sample(...)
    9.         └─mlr3misc::map(...)
   10.           └─base::lapply(.x, .f, ...)
   11.             └─mlr3spatiotempcv (local) FUN(X[[i]], ...)
  ── Error ('test-ResamplingRepeatedSpCVKnndm.R:41:3'): resampling iterations equals folds * repeats ──
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
       ▆
    1. ├─base::suppressMessages(suppressWarnings(rsp$instantiate(task))) at test-ResamplingRepeatedSpCVKnndm.R:41:3
    2. │ └─base::withCallingHandlers(...)
    3. ├─base::suppressWarnings(rsp$instantiate(task))
    4. │ └─base::withCallingHandlers(...)
    5. └─rsp$instantiate(task)
    6.   └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__instantiate(...)
    7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
    8.       └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__.sample(...)
    9.         └─mlr3misc::map(...)
   10.           └─base::lapply(.x, .f, ...)
   11.             └─mlr3spatiotempcv (local) FUN(X[[i]], ...)
  ── Error ('test-2-autoplot.R:331:3'): plot() works for 'spcv_knndm' ────────────
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
       ▆
    1. ├─base::suppressMessages(suppressWarnings(rsp$instantiate(task))) at test-2-autoplot.R:331:3
    2. │ └─base::withCallingHandlers(...)
    3. ├─base::suppressWarnings(rsp$instantiate(task))
    4. │ └─base::withCallingHandlers(...)
    5. └─rsp$instantiate(task)
    6.   └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__instantiate(...)
    7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
    8.       └─mlr3spatiotempcv:::.__ResamplingRepeatedSpCVKnndm__.sample(...)
    9.         └─mlr3misc::map(...)
   10.           └─base::lapply(.x, .f, ...)
   11.             └─mlr3spatiotempcv (local) FUN(X[[i]], ...)
  ── Error ('test-ResamplingSpCVKnndm.R:10:3'): mlr3spatiotempcv indices are the same as CAST knndm: modeldomain ──
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
      ▆
   1. ├─base::suppressMessages(suppressWarnings(rsmp$instantiate(task))) at test-ResamplingSpCVKnndm.R:10:3
   2. │ └─base::withCallingHandlers(...)
   3. ├─base::suppressWarnings(rsmp$instantiate(task))
   4. │ └─base::withCallingHandlers(...)
   5. └─rsmp$instantiate(task)
   6.   └─mlr3spatiotempcv:::.__ResamplingSpCVKnndm__instantiate(...)
   7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
   8.       └─mlr3spatiotempcv:::.__ResamplingSpCVKnndm__.sample(...)
  ── Error ('test-ResamplingSpCVKnndm.R:38:3'): mlr3spatiotempcv indices are the same as CAST knndm: ppoints ──
  Error in `CAST::knndm(tpoints = points, modeldomain = self$param_set$values$modeldomain, 
      ppoints = self$param_set$values$ppoints, k = self$param_set$values$folds, 
      maxp = self$param_set$values$maxp, clustering = self$param_set$values$clustering, 
      linkf = self$param_set$values$linkf, samplesize = self$param_set$values$samplesize, 
      sampling = self$param_set$values$sampling)`: unused argument (ppoints = self$param_set$values$ppoints)
  Backtrace:
      ▆
   1. ├─base::suppressMessages(suppressWarnings(rsmp$instantiate(task))) at test-ResamplingSpCVKnndm.R:38:3
   2. │ └─base::withCallingHandlers(...)
   3. ├─base::suppressWarnings(rsmp$instantiate(task))
   4. │ └─base::withCallingHandlers(...)
   5. └─rsmp$instantiate(task)
   6.   └─mlr3spatiotempcv:::.__ResamplingSpCVKnndm__instantiate(...)
   7.     └─private$.sample(task$row_ids, task$coordinates(), task$crs)
   8.       └─mlr3spatiotempcv:::.__ResamplingSpCVKnndm__.sample(...)
  
  [ FAIL 6 | WARN 0 | SKIP 23 | PASS 1197 ]
  Deleting unused snapshots:
  • 1-autoplot/autoplot-show-blocks-true-show-labels-true.svg
  • 1-autoplot/custom-cv-fold-1-2-sample-fold-n.svg
  • 1-autoplot/custom-cv-fold-1-2.svg
  • 1-autoplot/custom-cv-fold-1-sample-fold-n.svg
  • 1-autoplot/custom-cv-fold-1.svg
  • 1-autoplot/custom-cv-sample-fold-n.svg
  • 1-autoplot/cv-fold-1-2-groups-col-role.svg
  • 1-autoplot/cv-fold-1-2-sample-fold-n.svg
  • 1-autoplot/cv-fold-1-2.svg
  • 1-autoplot/cv-fold-1-groups-col-role.svg
  • 1-autoplot/cv-fold-1-sample-fold-n.svg
  • 1-autoplot/cv-fold-1.svg
  • 1-autoplot/cv-sample-fold-n.svg
  • 1-autoplot/repcv-fold-1-2-rep-1.svg
  • 1-autoplot/repcv-fold-1-2-rep-2.svg
  • 1-autoplot/repcv-fold-1-rep-1.svg
  • 1-autoplot/repcv-fold-1-rep-2.svg
  • 1-autoplot/repspcvblock-fold-1-2-rep-1.svg
  • 1-autoplot/repspcvblock-fold-1-2-rep-2.svg
  • 1-autoplot/repspcvblock-fold-1-rep-1.svg
  • 1-autoplot/repspcvblock-fold-1-rep-2.svg
  • 1-autoplot/repspcvcoords-fold-1-2-rep-1.svg
  • 1-autoplot/repspcvcoords-fold-1-2-rep-2.svg
  • 1-autoplot/repspcvcoords-fold-1-2-sample-fold-n.svg
  • 1-autoplot/repspcvcoords-fold-1-rep-1.svg
  • 1-autoplot/repspcvcoords-fold-1-rep-2.svg
  • 1-autoplot/repspcvcoords-fold-1-sample-fold-n.svg
  • 1-autoplot/repspcvcoords-sample-fold-n.svg
  • 1-autoplot/repspcvenv-fold-1-2-rep-1.svg
  • 1-autoplot/repspcvenv-fold-1-2-rep-2.svg
  • 1-autoplot/repspcvenv-fold-1-rep-1.svg
  • 1-autoplot/repspcvenv-fold-1-rep-2.svg
  • 1-autoplot/spcvblock-fold-1-2-sample-fold-n.svg
  • 1-autoplot/spcvblock-fold-1-2.svg
  • 1-autoplot/spcvblock-fold-1-sample-fold-n.svg
  • 1-autoplot/spcvblock-fold-1.svg
  • 1-autoplot/spcvblock-sample-fold-n.svg
  • 1-autoplot/spcvcoords-fold-1-2.svg
  • 1-autoplot/spcvcoords-fold-1.svg
  • 1-autoplot/spcvenv-fold-1-2-sample-fold-n.svg
  • 1-autoplot/spcvenv-fold-1-2.svg
  • 1-autoplot/spcvenv-fold-1-sample-fold-n.svg
  • 1-autoplot/spcvenv-fold-1.svg
  • 1-autoplot/spcvenv-sample-fold-n.svg
  • 2-autoplot/repspcvdisc-fold-1-2-rep-2.svg
  • 2-autoplot/repspcvdisc-fold-1-2-sample-fold-n.svg
  • 2-autoplot/repspcvdisc-fold-1-rep-1-sample-n-fold.svg
  • 2-autoplot/repspcvdisc-fold-1-rep-2.svg
  • 2-autoplot/repspcvdisc-fold-1-sample-fold-n.svg
  • 2-autoplot/repspcvdisc-sample-fold-n.svg
  • 2-autoplot/repspcvknndm-fold-1-2-rep-2.svg
  • 2-autoplot/repspcvknndm-fold-1-2-sample-fold-n.svg
  • 2-autoplot/repspcvknndm-fold-1-rep-1-sample-n-fold.svg
  • 2-autoplot/repspcvknndm-fold-1-rep-2.svg
  • 2-autoplot/repspcvknndm-fold-1-sample-fold-n.svg
  • 2-autoplot/repspcvknndm-sample-fold-n.svg
  • 2-autoplot/repspcvtiles-fold-1-2-rep-2.svg
  • 2-autoplot/repspcvtiles-fold-1-2-sample-fold-n.svg
  • 2-autoplot/repspcvtiles-fold-1-2.svg
  • 2-autoplot/repspcvtiles-fold-1-rep-2.svg
  • 2-autoplot/repspcvtiles-fold-1-sample-fold-n.svg
  • 2-autoplot/repspcvtiles-fold-1.svg
  • 2-autoplot/repspcvtiles-sample-fold-n.svg
  • 2-autoplot/repspcvtiles-show-omitted.svg
  • 2-autoplot/repsptcvcstf-2d-space-var-fold-1-2-rep-2.svg
  • 2-autoplot/repsptcvcstf-2d-space-var-fold-1-rep-2.svg
  • 2-autoplot/repsptcvcstf-fold-1-2-rep-1.svg
  • 2-autoplot/repsptcvcstf-fold-1-2-rep-2.svg
  • 2-autoplot/repsptcvcstf-fold-1-rep-1-sample-fold-n.svg
  • 2-autoplot/repsptcvcstf-fold-1-rep-2.svg
  • 2-autoplot/spcvdisc-fold-1-2.svg
  • 2-autoplot/spcvdisc-fold-1.svg
  • 2-autoplot/spcvdisc-show-omitted.svg
  • 2-autoplot/spcvknndm-all-test-sets.svg
  • 2-autoplot/spcvknndm-fold-1-2.svg
  • 2-autoplot/spcvknndm-fold-1.svg
  • 2-autoplot/sptcvcstf-2d-space-var-all-test-sets.svg
  • 2-autoplot/sptcvcstf-2d-space-var-fold-1-2.svg
  • 2-autoplot/sptcvcstf-2d-space-var-fold-1.svg
  • 2-autoplot/sptcvcstf-2d-time-var-all-test-sets.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-rep-2.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-sample-fold-n.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1-2.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1-rep-2.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1-sample-fold-n.svg
  • 2-autoplot/sptcvcstf-2d-time-var-fold-1.svg
  • 2-autoplot/sptcvcstf-2d-time-var-sample-fold-n.svg
  • 2-autoplot/sptcvcstf-3d-time-var-fold-1-2-sample-fold-n.svg
  • 2-autoplot/sptcvcstf-3d-time-var-fold-1-2.svg
  • 2-autoplot/sptcvcstf-3d-time-var-fold-1-sample-fold-n.svg
  • autoplot_buffer/spcvbuffer-fold-1-2.svg
  Error: Test failures
  Execution halted