Error(s) in re-building vignettes:
--- re-building 'rbioapi.Rmd' using rmarkdown
Retrieving taxonomic nodes that their scientific name field contain adenovirus (page 1).
Iterating from page 1 to page 3.
Retrieving taxonomic nodes that their scientific name field contain adenovirus (page 1).
Retrieving taxonomic nodes that their scientific name field contain adenovirus (page 2).
Retrieving taxonomic nodes that their scientific name field contain adenovirus (page 3).
--- finished re-building 'rbioapi.Rmd'

--- re-building 'rbioapi_do_enrich.Rmd' using rmarkdown
--- finished re-building 'rbioapi_do_enrich.Rmd'

--- re-building 'rbioapi_enrichr.Rmd' using rmarkdown
Retrieving List of available libraries and statistics from Enrichr human.
--Step 1/3:
Retrieving List of available libraries and statistics from Enrichr human.
--Step 2/3:
Uploading 15 gene symbols to Enrichr human.
--Step 3/3:
Enriching gene-list 50521269 against Enrichr human library: MSigDB_Hallmark_2020.
--Step 1/3:
Retrieving List of available libraries and statistics from Enrichr human.
--Step 2/3:
Uploading 15 gene symbols to Enrichr human.
--Step 3/3:
Enriching gene-list 50521270 using multiple Enrichr human libraries.
Note: You have selected '3' Enrichr human libraries. Note that for each library, a separate call should be sent to Enrichr server. Thus, this could take a while depending on the number of selected libraries and your network connection.
Retrieving List of available libraries and statistics from Enrichr human.
Uploading 15 gene symbols to Enrichr human.
Enriching gene-list 50521271 against Enrichr human library: Table_Mining_of_CRISPR_Studies.
--- finished re-building 'rbioapi_enrichr.Rmd'

--- re-building 'rbioapi_jaspar.Rmd' using rmarkdown
Retrieving a list of all releases of JASPAR database.
Retrieving a details of JASPAR database release number 7.
Retrieving a list of collections available in JASPAR release 2020.
Retrieving a list of matrix profiles available in JASPAR CORE collection release 2022 (page 1).
Retrieving a list of taxonomic groups available in JASPAR release 2020.
Retrieving a list of matrix profiles of taxonomic group insects available in JASPAR release 2022 (page 1).
Retrieving a list of species available in JASPAR release 2020.
Retrieving a list of matrix profiles of species 9606 available in JASPAR release 2022 (page 1).
Retrieving details of matrix profile with ID MA0600.2.
Retrieving details of TFFM profile with ID TFFM0056.3.
--- finished re-building 'rbioapi_jaspar.Rmd'

--- re-building 'rbioapi_mieaa.Rmd' using rmarkdown
Quitting from lines 69-88 (rbioapi_mieaa.Rmd) 
Error: processing vignette 'rbioapi_mieaa.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building 'rbioapi_mieaa.Rmd'

--- re-building 'rbioapi_panther.Rmd' using rmarkdown
--- finished re-building 'rbioapi_panther.Rmd'

--- re-building 'rbioapi_reactome.Rmd' using rmarkdown
Retrieving Reactome Analysis Results of your supplied Identifiers.
Querying Reactome knowledgebase with the supplied ID(s)
Querying Reactome knowledgebase with the supplied ID(s)
Retrieving Reactome's ReferenceEntity that have a cross-reference to CD40.
Retrieving Reactome pathways that contain CD40 from hgnc resource.
--- finished re-building 'rbioapi_reactome.Rmd'

--- re-building 'rbioapi_string.Rmd' using rmarkdown
Mapping 14 Input Identifiers to STRING Identifiers.
Retrieving STRING Network interaction of 14 Input Identifiers.
Retrieving Interacting partners of 1 Input Identifiers.
Retrieving STRING network image of 14 Input Identifiers.
Retrieving STRING network image of 14 Input Identifiers.
Performing functional enrichment of 14 Input Identifiers.
Performing PPI Enrichment of 14 Input Identifiers.
--- finished re-building 'rbioapi_string.Rmd'

--- re-building 'rbioapi_uniprot.Rmd' using rmarkdown
Retrieving UniProt Entity with accession number P29965.
Searching UniProt and retrieving proteins that match your supplied inputs.
Searching UniProt and retrieving proteins that match your supplied inputs.
Searching UniProt and retrieving proteins that match your supplied inputs.
Searching UniProt and retrieving proteins that match your supplied inputs.
Searching UniProt and retrieving proteins that match your supplied inputs.
--- finished re-building 'rbioapi_uniprot.Rmd'

SUMMARY: processing the following file failed:
  'rbioapi_mieaa.Rmd'

Error: Vignette re-building failed.
Execution halted