* installing *source* package 'surtvep' ... ** package 'surtvep' successfully unpacked and MD5 sums checked ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs using C++ compiler: 'g++.exe (GCC) 13.2.0' make[1]: Entering directory '/d/temp/Rtmp80h6jE/R.INSTALL14bf021d46243/surtvep/src' g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PenalizeStopCpp.cpp -o PenalizeStopCpp.o In file included from D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/RcppCommon.h:188, from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:25, from D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include/RcppArmadillo.h:29, from PenalizeStopCpp.cpp:5: In function 'SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]', inlined from 'SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]' at D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from 'SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]' at D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]' at D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from 'SEXPREC* Rcpp::wrap(const T&) [with T = int]' at D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from 'Rcpp::internal::generic_name_proxy& Rcpp::internal::generic_name_proxy::operator=(const T&) [with T = int; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/vector/proxy.h:157:11, inlined from 'Rcpp::List Lambda_estimate_ties2(int, arma::colvec&, arma::mat&, arma::mat&, arma::mat&, arma::vec&)' at PenalizeStopCpp.cpp:2649:25: D:/RCompile/CRANpkg/lib/4.4/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: 'index' may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ PenalizeStopCpp.cpp: In function 'Rcpp::List Lambda_estimate_ties2(int, arma::colvec&, arma::mat&, arma::mat&, arma::mat&, arma::vec&)': PenalizeStopCpp.cpp:2625:13: note: 'index' was declared here 2625 | int index; | ^~~~~ g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c header.cpp -o header.o g++ -std=gnu++17 -shared -s -static-libgcc -o surtvep.dll tmp.def PenalizeStopCpp.o RcppExports.o header.o -fopenmp -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.0/bin/x64 -lR make[1]: Leaving directory '/d/temp/Rtmp80h6jE/R.INSTALL14bf021d46243/surtvep/src' make[1]: Entering directory '/d/temp/Rtmp80h6jE/R.INSTALL14bf021d46243/surtvep/src' make[1]: Leaving directory '/d/temp/Rtmp80h6jE/R.INSTALL14bf021d46243/surtvep/src' installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-surtvep/00new/surtvep/libs/x64 ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'surtvep' as surtvep_1.0.0.zip * DONE (surtvep)