• using R version 2.7.0 RC (2008-04-14 r45332)
  • using session charset: ISO8859-1
  • checking for file 'glmpath/DESCRIPTION' ... OK
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  • this is package 'glmpath' version '0.94'
  • checking package name space information ... OK
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  • checking package dependencies ... OK
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  • checking if this is a source package ... OK
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  • checking whether package 'glmpath' can be installed ... OK
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  • checking package directory ... OK
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  • checking for portable file names ... OK
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  • checking DESCRIPTION meta-information ... OK
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  • checking top-level files ... OK
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  • checking index information ... OK
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  • checking package subdirectories ... OK
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  • checking R files for non-ASCII characters ... OK
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  • checking R files for syntax errors ... OK
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  • checking whether the package can be loaded ... OK
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  • checking whether the package can be loaded with stated dependencies ... OK
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  • checking whether the name space can be loaded with stated dependencies ... OK
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  • checking for unstated dependencies in R code ... OK
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  • checking S3 generic/method consistency ... OK
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  • checking replacement functions ... OK
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  • checking foreign function calls ... OK
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  • checking R code for possible problems ... OK
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  • checking Rd files ... OK
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  • checking Rd cross-references ... OK
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  • checking for missing documentation entries ... OK
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  • checking for code/documentation mismatches ... OK
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  • checking Rd \usage sections ... OK
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  • checking data for non-ASCII characters ... OK
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  • checking line endings in C/C++/Fortran sources/headers ... OK
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  • checking line endings in Makefiles ... OK
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  • checking for portable use of $BLAS_LIBS ... OK
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  • creating glmpath-Ex.R ... OK
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  • checking examples ... ERROR
    Running examples in 'glmpath-Ex.R' failed.
    The error most likely occurred in:

    > ### * bootstrap.path
    >
    > flush(stderr()); flush(stdout())
    >
    > ### Name: bootstrap.path
    > ### Title: Generates a set of bootstrap coefficients for either glmpath or
    > ### coxpath
    > ### Aliases: bootstrap.path
    > ### Keywords: models regression
    >
    > ### ** Examples
    >
    > data(heart.data)
    > attach(heart.data)
    > bootstrap.a <- bootstrap.path(x, y, B=100, method="bic")
    > (stdout())
    description class mode text opened can read
    "stdout" "terminal" "w" "text" "opened" "no"
    can write
    "yes"
    >
    > ### Name: cv.coxpath
    > ### Title: Computes cross-validated (minus) log-partial-likelihoods for
    > ### coxpath
    > ### Aliases: cv.coxpath
    > ### Keywords: models regression
    >
    > ### ** Examples
    >
    > data(lung.data)
    > attach(lung.data)

    The following object(s) are masked from heart.data :

    x

    > cv <- cv.coxpath(lung.data)
    CV Fold 1
    CV Fold 2
    CV Fold 3
    CV Fold 4
    CV Fold 5
    > ict.glmpath
    Error: object "ict.glmpath" not found
    Execution halted