* installing *source* package 'Racmacs' ...
** package 'Racmacs' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 13.2.0'
make[1]: Entering directory '/d/temp/Rtmp8q7Va9/R.INSTALL292b073ec7468/Racmacs/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Racmacs_wrappers.cpp -o Racmacs_wrappers.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Racmacs_wrappers_antigens.cpp -o Racmacs_wrappers_antigens.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Racmacs_wrappers_optimizations.cpp -o Racmacs_wrappers_optimizations.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Racmacs_wrappers_plotspec.cpp -o Racmacs_wrappers_plotspec.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Racmacs_wrappers_sera.cpp -o Racmacs_wrappers_sera.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_bootstrap.cpp -o ac_bootstrap.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_dimension_test.cpp -o ac_dimension_test.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_errorlines.cpp -o ac_errorlines.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_hemi_test.cpp -o ac_hemi_test.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_matching.cpp -o ac_matching.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_merge.cpp -o ac_merge.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_move_trapped_points.cpp -o ac_move_trapped_points.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_optim_map_stress.cpp -o ac_optim_map_stress.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_optimization.cpp -o ac_optimization.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_optimize_ag_reactivity.cpp -o ac_optimize_ag_reactivity.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_stress.cpp -o ac_stress.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_stress_blobs.cpp -o ac_stress_blobs.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_titers.cpp -o ac_titers.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c ac_utils.cpp -o ac_utils.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c acmap_map.cpp -o acmap_map.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c acmap_optimization.cpp -o acmap_optimization.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c acmap_point.cpp -o acmap_point.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c acmap_titers.cpp -o acmap_titers.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c json_assert.cpp -o json_assert.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c json_read_to_acmap.cpp -o json_read_to_acmap.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c json_write_from_acmap.cpp -o json_write_from_acmap.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c procrustes.cpp -o procrustes.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils.cpp -o utils.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils_error.cpp -o utils_error.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils_euc_dist.cpp -o utils_euc_dist.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils_geometry.cpp -o utils_geometry.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils_interpolation.cpp -o utils_interpolation.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -DSTRICT_R_HEADERS -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppEnsmallen/include' -I'D:/RCompile/CRANpkg/lib/4.4/rapidjsonr/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c utils_transformation.cpp -o utils_transformation.o
g++ -std=gnu++17 -shared -s -static-libgcc -o Racmacs.dll tmp.def Racmacs_wrappers.o Racmacs_wrappers_antigens.o Racmacs_wrappers_optimizations.o Racmacs_wrappers_plotspec.o Racmacs_wrappers_sera.o RcppExports.o ac_bootstrap.o ac_dimension_test.o ac_errorlines.o ac_hemi_test.o ac_matching.o ac_merge.o ac_move_trapped_points.o ac_optim_map_stress.o ac_optimization.o ac_optimize_ag_reactivity.o ac_stress.o ac_stress_blobs.o ac_titers.o ac_utils.o acmap_map.o acmap_optimization.o acmap_point.o acmap_titers.o json_assert.o json_read_to_acmap.o json_write_from_acmap.o procrustes.o utils.o utils_error.o utils_euc_dist.o utils_geometry.o utils_interpolation.o utils_transformation.o -fopenmp -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.0/bin/x64 -lR
make[1]: Leaving directory '/d/temp/Rtmp8q7Va9/R.INSTALL292b073ec7468/Racmacs/src'
make[1]: Entering directory '/d/temp/Rtmp8q7Va9/R.INSTALL292b073ec7468/Racmacs/src'
make[1]: Leaving directory '/d/temp/Rtmp8q7Va9/R.INSTALL292b073ec7468/Racmacs/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-Racmacs/00new/Racmacs/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Racmacs' as Racmacs_1.2.9.zip
* DONE (Racmacs)