* installing *source* package 'BoltzMM' ... ** package 'BoltzMM' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++.exe (GCC) 13.2.0' using C++11 make[1]: Entering directory '/d/temp/RtmpUxZCQp/R.INSTALL150ac50841a17/BoltzMM/src' g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/BH/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c BoltzMM.cpp -o BoltzMM.o BoltzMM.cpp:10: warning: "NDEBUG" redefined 10 | #define NDEBUG | : note: this is the location of the previous definition BoltzMM.cpp: In function 'double pfvbm(arma::vec, arma::vec, arma::mat)': BoltzMM.cpp:56:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 56 | if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~~ BoltzMM.cpp:56:38: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 56 | if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp:56:56: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 56 | if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp: In function 'arma::rowvec allpfvbm(arma::vec, arma::mat)': BoltzMM.cpp:90:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 90 | if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp:90:37: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 90 | if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp: In function 'arma::mat rfvbm(int, arma::vec, arma::mat)': BoltzMM.cpp:125:17: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 125 | if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp:125:35: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 125 | if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){ | ~~~~~~~~~~~^~~ BoltzMM.cpp: In function 'Rcpp::List fitfvbm(arma::mat, arma::vec, arma::mat, double, int)': BoltzMM.cpp:167:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 167 | if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){ | ~~~~~~~~~~~^~~ BoltzMM.cpp:167:37: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 167 | if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){ | ~~~~~~~~~~~^~~ BoltzMM.cpp:167:56: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare] 167 | if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){ | ~~~~~~~~~~~~^~~ g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.4/BH/include' -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -shared -s -static-libgcc -o BoltzMM.dll tmp.def BoltzMM.o RcppExports.o -fopenmp -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.0/bin/x64 -lR make[1]: Leaving directory '/d/temp/RtmpUxZCQp/R.INSTALL150ac50841a17/BoltzMM/src' make[1]: Entering directory '/d/temp/RtmpUxZCQp/R.INSTALL150ac50841a17/BoltzMM/src' make[1]: Leaving directory '/d/temp/RtmpUxZCQp/R.INSTALL150ac50841a17/BoltzMM/src' installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-BoltzMM/00new/BoltzMM/libs/x64 ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'BoltzMM' as BoltzMM_0.1.4.zip * DONE (BoltzMM)