* installing *source* package 'BayesSurvive' ...
** package 'BayesSurvive' successfully unpacked and MD5 sums checked
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
using C++ compiler: 'g++.exe (GCC) 13.2.0'
make[1]: Entering directory '/d/temp/Rtmpo7S3V7/R.INSTALL208a0411b12c9/BayesSurvive/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp    -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
gcc  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"     -pedantic -Wstrict-prototypes -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp    -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c settingInterval.cpp -o settingInterval.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.4/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include'   -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include"  -fopenmp    -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c updateRP_genomic_cpp.cpp -o updateRP_genomic_cpp.o
updateRP_genomic_cpp.cpp: In function 'Rcpp::List updateBH_list_cpp(Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, double)':
updateRP_genomic_cpp.cpp:69:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   69 |     for (unsigned int g = 0; g < S; ++g)
      |                              ~~^~~
updateRP_genomic_cpp.cpp:83:36: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
   83 |         for (unsigned int j = 0; j < J_tmp; ++j)
      |                                  ~~^~~~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o BayesSurvive.dll tmp.def RcppExports.o init.o settingInterval.o updateRP_genomic_cpp.o -fopenmp -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.0/bin/x64 -lR
make[1]: Leaving directory '/d/temp/Rtmpo7S3V7/R.INSTALL208a0411b12c9/BayesSurvive/src'
make[1]: Entering directory '/d/temp/Rtmpo7S3V7/R.INSTALL208a0411b12c9/BayesSurvive/src'
make[1]: Leaving directory '/d/temp/Rtmpo7S3V7/R.INSTALL208a0411b12c9/BayesSurvive/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-BayesSurvive/00new/BayesSurvive/libs/x64
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BayesSurvive' as BayesSurvive_0.0.1.zip
* DONE (BayesSurvive)