- using R version 2.15.0 (2012-03-30)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'qPCR.CT/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'qPCR.CT' version '1.1'
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
CRAN requires a NAMESPACE file for all submissions.
- checking whether package 'qPCR.CT' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
Calc.Expr: no visible binding for global variable 'Type'
Calc.Expr: no visible binding for global variable 'Identifier'
Calc.Expr: no visible binding for global variable 'Fluor'
GroupPlot: no visible binding for global variable 'Type'
plot.CT: no visible binding for global variable 'tr_gene_name'
- checking Rd files ... NOTE
prepare_Rd: Calc.Expr.Rd:38-40: Dropping empty section \details
prepare_Rd: Calc.Expr.Rd:41-47: Dropping empty section \value
prepare_Rd: Calc.Expr.Rd:54-56: Dropping empty section \note
prepare_Rd: Calc.Expr.Rd:48-50: Dropping empty section \references
prepare_Rd: Calc.Expr.Rd:60-62: Dropping empty section \seealso
prepare_Rd: GroupPlot.Rd:34-36: Dropping empty section \details
prepare_Rd: GroupPlot.Rd:37-43: Dropping empty section \value
prepare_Rd: GroupPlot.Rd:50-52: Dropping empty section \note
prepare_Rd: GroupPlot.Rd:44-46: Dropping empty section \references
prepare_Rd: GroupPlot.Rd:56-58: Dropping empty section \seealso
prepare_Rd: cal.CT.Rd:18-20: Dropping empty section \details
prepare_Rd: cal.CT.Rd:21-23: Dropping empty section \source
prepare_Rd: cal_ct.Rd:48-50: Dropping empty section \note
prepare_Rd: cal_ct.Rd:42-44: Dropping empty section \references
prepare_Rd: cal_ct.Rd:54-56: Dropping empty section \seealso
prepare_Rd: filename.Rd:16-18: Dropping empty section \references
prepare_Rd: plot.CT.Rd:25-27: Dropping empty section \details
prepare_Rd: plot.CT.Rd:28-34: Dropping empty section \value
prepare_Rd: plot.CT.Rd:41-43: Dropping empty section \note
prepare_Rd: plot.CT.Rd:35-37: Dropping empty section \references
prepare_Rd: plot.CT.Rd:47-49: Dropping empty section \seealso
prepare_Rd: repeatnum.Rd:15-17: Dropping empty section \details
prepare_Rd: repeatnum.Rd:18-20: Dropping empty section \source
prepare_Rd: repeatnum.Rd:21-23: Dropping empty section \references
prepare_Rd: tr_gene_name.Rd:15-17: Dropping empty section \details
prepare_Rd: tr_gene_name.Rd:18-20: Dropping empty section \source
prepare_Rd: tr_gene_name.Rd:21-23: Dropping empty section \references
prepare_Rd: tr_group_name.Rd:15-17: Dropping empty section \details
prepare_Rd: tr_group_name.Rd:18-20: Dropping empty section \source
prepare_Rd: tr_group_name.Rd:21-23: Dropping empty section \references
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
- checking PDF version of manual ... OK
NOTE: There were 3 notes.
See
'd:/Rcompile/CRANpkg/local/2.15/qPCR.CT.Rcheck/00check.log'
for details.