• using R version 3.0.1 (2013-05-16)
• using platform: x86_64-w64-mingw32 (64-bit)
• using session charset: ISO8859-1
• checking for file 'lme4/DESCRIPTION' ... OK
• this is package 'lme4' version '0.999999-2'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'lme4' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
  ** checking loading without being on the library search path ... OK
• loading checks for arch 'x64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
  ** checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable compilation flags in Makevars ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking installed files from 'inst/doc' ... OK
• checking examples ...
  ** running examples for arch 'i386' ... OK
  ** running examples for arch 'x64' ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ...
  ** running tests for arch 'i386' OK
  Running 'Gamma.R'
  Running 'agq.R'
  Running 'coefs.R'
  Running 'drop.R'
  Running 'extras.R'
  Running 'getME.R'
  Running 'lmList.R'
  Running 'lmer-1.R'
  Comparing 'lmer-1.Rout' to 'lmer-1.Rout.save' ...431c431
  < 15.2354 0.1856
  ---
  > 15.2355 0.1856
  442c442
  < 140.642 -1.424 -1.424 0.014
  ---
  > 140.641 -1.424 -1.424 0.014
  477c477
  < (Intercept) 15.235
  ---
  > (Intercept) 15.236
  485,486c485,486
  < [1,] -8.3504
  < [2,] 8.3504
  ---
  > [1,] -8.3505
  > [2,] 8.3505
  515c515
  < Error in (function (fr, FL, start, REML, verbose) :
  ---
  > Error in function (fr, FL, start, REML, verbose) :
  Running 'lmer-conv.R'
  Running 'lmer.R'
  Running 'nlmer-conv.R'
  Running 'nlmer.R'
  Comparing 'nlmer.Rout' to 'nlmer.Rout.save' ...60c60
  < Subject lKa 0.227492 0.47696
  ---
  > Subject lKa 0.227490 0.47696
  62c62
  < Residual 0.591691 0.76921
  ---
  > Residual 0.591692 0.76921
  Running 'sigma.R'
  Running 'simulate.R'
  ** running tests for arch 'x64' OK
  Running 'Gamma.R'
  Running 'agq.R'
  Running 'coefs.R'
  Running 'drop.R'
  Running 'extras.R'
  Running 'getME.R'
  Running 'lmList.R'
  Running 'lmer-1.R'
  Comparing 'lmer-1.Rout' to 'lmer-1.Rout.save' ...442c442
  < 140.642 -1.424 -1.424 0.014
  ---
  > 140.641 -1.424 -1.424 0.014
  473c473
  < 1 0 300 900 5
  ---
  > 1 0 300 900 4
  515c515
  < Error in (function (fr, FL, start, REML, verbose) :
  ---
  > Error in function (fr, FL, start, REML, verbose) :
  Running 'lmer-conv.R'
  Running 'lmer.R'
  Running 'nlmer-conv.R'
  Running 'nlmer.R'
  Comparing 'nlmer.Rout' to 'nlmer.Rout.save' ...60c60
  < Subject lKa 0.227496 0.47697
  ---
  > Subject lKa 0.227490 0.47696
  62c62
  < Residual 0.591689 0.76921
  ---
  > Residual 0.591692 0.76921
  68,69c68,69
  < lKa 0.47409 0.15291 3.10
  < lCl -3.23539 0.05236 -61.79
  ---
  > lKa 0.47408 0.15291 3.10
  > lCl -3.23538 0.05236 -61.79
  Running 'sigma.R'
  Running 'simulate.R'
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK