• using R version 3.3.1 (2016-06-21)
• using platform: x86_64-w64-mingw32 (64-bit)
• using session charset: ISO8859-1
• checking for file 'intReg/DESCRIPTION' ... OK
• this is package 'intReg' version '0.2-8'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'intReg' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  intReg: no visible binding for global variable 'plogis'
  intReg: no visible binding for global variable 'pnorm'
  intReg: no visible binding for global variable 'pcauchy'
  intReg: no visible binding for global variable 'dlogis'
  intReg: no visible binding for global variable 'dnorm'
  intReg: no visible binding for global variable 'dcauchy'
  intReg: no visible global function definition for 'model.matrix'
  intReg: no visible global function definition for 'model.weights'
  intReg: no visible global function definition for 'model.offset'
  intReg: no visible global function definition for 'model.response'
  intReg: no visible global function definition for 'glm.fit'
  intReg: no visible global function definition for 'binomial'
  intReg: no visible binding for global variable 'coef'
  intReg: no visible global function definition for 'lm'
  intReg: no visible global function definition for 'coef'
  intReg: no visible global function definition for 'var'
  model.matrix.intReg: no visible global function definition for
    'model.frame'
  print.intReg: no visible global function definition for 'coef'
  print.summary.intReg: no visible global function definition for
    'logLik'
  print.summary.intReg: no visible global function definition for
    'printCoefmat'
  summary.intReg: no visible global function definition for 'coef'
  Undefined global functions or variables:
    binomial coef dcauchy dlogis dnorm glm.fit lm logLik model.frame
    model.matrix model.offset model.response model.weights pcauchy plogis
    pnorm printCoefmat var
  Consider adding
    importFrom("stats", "binomial", "coef", "dcauchy", "dlogis", "dnorm",
               "glm.fit", "lm", "logLik", "model.frame", "model.matrix",
               "model.offset", "model.response", "model.weights",
               "pcauchy", "plogis", "pnorm", "printCoefmat", "var")
  to your NAMESPACE file.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [9s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [7s] OK
    Running 'intReg.R' [6s]
    Comparing 'intReg.Rout' to 'intReg.Rout.save' ...35c35
  < 7.392272 -0.255738 0.372819 -0.044662 -0.195330 -0.034821
  ---
  > 7.390819 -0.255675 0.372862 -0.044666 -0.195242 -0.034879
  37c37
  < -0.687016 -0.864356 -0.012266 0.145239 0.002322 -0.157660
  ---
  > -0.687059 -0.864370 -0.012024 0.145218 0.002306 -0.157557
  39c39
  < 0.539081 0.521046 -1.509030 0.237458 0.275769 -0.125698
  ---
  > 0.539109 0.521039 -1.508886 0.237526 0.275681 -0.125687
  41c41
  < 0.436253 2.612309
  ---
  > 0.436197 2.612337
  44c44
  < 7.392272 -0.255738 0.372819 -0.044662 -0.195330 -0.034821
  ---
  > 7.390819 -0.255675 0.372862 -0.044666 -0.195242 -0.034879
  46c46
  < -0.687016 -0.864356 -0.012266 0.145239 0.002322 -0.157660
  ---
  > -0.687059 -0.864370 -0.012024 0.145218 0.002306 -0.157557
  48c48
  < 0.539081 0.521046 -1.509030 0.237458 0.275769 -0.125698
  ---
  > 0.539109 0.521039 -1.508886 0.237526 0.275681 -0.125687
  50c50
  < 0.436253 -Inf 0.693147 -Inf 1.609438 -Inf
  ---
  > 0.436197 -Inf 0.693147 -Inf 1.609438 -Inf
  58c58
  < Inf 5.521461 Inf 2.612309
  ---
  > Inf 5.521461 Inf 2.612337
  61c61
  < 2.95565 0.51570 0.31160 0.01543 0.14256 0.23038
  ---
  > 2.95567 0.51571 0.31161 0.01543 0.14256 0.23039
  63c63
  < 0.19383 0.20823 0.29107 0.25380 0.20609 0.20115
  ---
  > 0.19383 0.20823 0.29107 0.25379 0.20609 0.20115
  65,75c65,67
  < 0.20615 0.20251 1.05768 0.46895 0.52455 0.15554
  < majoryes L 1 U 1 L 2 U 2 L 3
  < 0.44708 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 3 L 4 U 4 L 5 U 5 L 6
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 6 L 7 U 7 L 8 U 8 L 9
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 9 L 10 U 10 L 11 U 11 L 12
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 12 L 13 U 13 sigma
  < 0.00000 0.00000 0.00000 0.34250
  ---
  > 0.20615 0.20251 1.05768 0.46896 0.52456 0.15555
  > majoryes sigma
  > 0.44708 0.34251
  78c70
  < 2.95565 0.51570 0.31160 0.01543 0.14256 0.23038
  ---
  > 2.95567 0.51571 0.31161 0.01543 0.14256 0.23039
  80c72
  < 0.19383 0.20823 0.29107 0.25380 0.20609 0.20115
  ---
  > 0.19383 0.20823 0.29107 0.25379 0.20609 0.20115
  82,92c74,76
  < 0.20615 0.20251 1.05768 0.46895 0.52455 0.15554
  < majoryes L 1 U 1 L 2 U 2 L 3
  < 0.44708 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 3 L 4 U 4 L 5 U 5 L 6
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 6 L 7 U 7 L 8 U 8 L 9
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 9 L 10 U 10 L 11 U 11 L 12
  < 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000
  < U 12 L 13 U 13 sigma
  < 0.00000 0.00000 0.00000 0.34250
  ---
  > 0.20615 0.20251 1.05768 0.46896 0.52456 0.15555
  > majoryes sigma
  > 0.44708 0.34251
  97c81
  < BHHH maximisation, 12 iterations
  ---
  > BHHH maximisation, 18 iterations
  102,121c86,105
  < (Intercept) 7.39227 2.95565 2.50 0.01295 *
  < sexmale -0.25574 0.51570 -0.50 0.62035
  < log(income) 0.37282 0.31160 1.20 0.23253
  < age -0.04466 0.01543 -2.90 0.00409 **
  < schooling -0.19533 0.14256 -1.37 0.17173
  < recparks -0.03482 0.23038 -0.15 0.87997
  < jobs -0.68702 0.19383 -3.54 0.00046 ***
  < lowrisk -0.86436 0.20823 -4.15 4.4e-05 ***
  < wildlife -0.01227 0.29107 -0.04 0.96642
  < future 0.14524 0.25380 0.57 0.56761
  < aboriginal 0.00232 0.20609 0.01 0.99102
  < finben -0.15766 0.20115 -0.78 0.43382
  < mineparks 0.53908 0.20615 2.61 0.00941 **
  < moreparks 0.52105 0.20251 2.57 0.01060 *
  < gov -1.50903 1.05768 -1.43 0.15477
  < envconyes 0.23746 0.46895 0.51 0.61300
  < vparksyes 0.27577 0.52455 0.53 0.59950
  < tvenv -0.12570 0.15554 -0.81 0.41970
  < majoryes 0.43625 0.44708 0.98 0.33001
  < sigma 2.61231 0.34250 7.63 3.8e-13 ***
  ---
  > (Intercept) 7.39082 2.95567 2.50 0.01297 *
  > sexmale -0.25567 0.51571 -0.50 0.62044
  > log(income) 0.37286 0.31161 1.20 0.23248
  > age -0.04467 0.01543 -2.90 0.00408 **
  > schooling -0.19524 0.14256 -1.37 0.17192
  > recparks -0.03488 0.23039 -0.15 0.87978
  > jobs -0.68706 0.19383 -3.54 0.00046 ***
  > lowrisk -0.86437 0.20823 -4.15 4.4e-05 ***
  > wildlife -0.01202 0.29107 -0.04 0.96708
  > future 0.14522 0.25379 0.57 0.56765
  > aboriginal 0.00231 0.20609 0.01 0.99108
  > finben -0.15756 0.20115 -0.78 0.43411
  > mineparks 0.53911 0.20615 2.62 0.00940 **
  > moreparks 0.52104 0.20251 2.57 0.01060 *
  > gov -1.50889 1.05768 -1.43 0.15481
  > envconyes 0.23753 0.46896 0.51 0.61291
  > vparksyes 0.27568 0.52456 0.53 0.59962
  > tvenv -0.12569 0.15555 -0.81 0.41976
  > majoryes 0.43620 0.44708 0.98 0.33007
  > sigma 2.61234 NA NA NA
  129c113
  < BHHH maximisation, 12 iterations
  ---
  > BHHH maximisation, 18 iterations
  134,179c118,163
  < (Intercept) 7.39227 2.95565 2.50 0.01295 *
  < sexmale -0.25574 0.51570 -0.50 0.62035
  < log(income) 0.37282 0.31160 1.20 0.23253
  < age -0.04466 0.01543 -2.90 0.00409 **
  < schooling -0.19533 0.14256 -1.37 0.17173
  < recparks -0.03482 0.23038 -0.15 0.87997
  < jobs -0.68702 0.19383 -3.54 0.00046 ***
  < lowrisk -0.86436 0.20823 -4.15 4.4e-05 ***
  < wildlife -0.01227 0.29107 -0.04 0.96642
  < future 0.14524 0.25380 0.57 0.56761
  < aboriginal 0.00232 0.20609 0.01 0.99102
  < finben -0.15766 0.20115 -0.78 0.43382
  < mineparks 0.53908 0.20615 2.61 0.00941 **
  < moreparks 0.52105 0.20251 2.57 0.01060 *
  < gov -1.50903 1.05768 -1.43 0.15477
  < envconyes 0.23746 0.46895 0.51 0.61300
  < vparksyes 0.27577 0.52455 0.53 0.59950
  < tvenv -0.12570 0.15554 -0.81 0.41970
  < majoryes 0.43625 0.44708 0.98 0.33001
  < L 1 -Inf 0.00000 -Inf < 2e-16 ***
  < U 1 0.69315 0.00000 Inf < 2e-16 ***
  < L 2 -Inf 0.00000 -Inf < 2e-16 ***
  < U 2 1.60944 0.00000 Inf < 2e-16 ***
  < L 3 -Inf 0.00000 -Inf < 2e-16 ***
  < U 3 2.99573 0.00000 Inf < 2e-16 ***
  < L 4 -Inf 0.00000 -Inf < 2e-16 ***
  < U 4 3.91202 0.00000 Inf < 2e-16 ***
  < L 5 0.69315 0.00000 Inf < 2e-16 ***
  < U 5 1.60944 0.00000 Inf < 2e-16 ***
  < L 6 1.60944 0.00000 Inf < 2e-16 ***
  < U 6 2.99573 0.00000 Inf < 2e-16 ***
  < L 7 2.99573 0.00000 Inf < 2e-16 ***
  < U 7 3.91202 0.00000 Inf < 2e-16 ***
  < L 8 2.99573 0.00000 Inf < 2e-16 ***
  < U 8 Inf 0.00000 Inf < 2e-16 ***
  < L 9 3.91202 0.00000 Inf < 2e-16 ***
  < U 9 4.60517 0.00000 Inf < 2e-16 ***
  < L 10 3.91202 0.00000 Inf < 2e-16 ***
  < U 10 Inf 0.00000 Inf < 2e-16 ***
  < L 11 4.60517 0.00000 Inf < 2e-16 ***
  < U 11 5.52146 0.00000 Inf < 2e-16 ***
  < L 12 4.60517 0.00000 Inf < 2e-16 ***
  < U 12 Inf 0.00000 Inf < 2e-16 ***
  < L 13 5.52146 0.00000 Inf < 2e-16 ***
  < U 13 Inf 0.00000 Inf < 2e-16 ***
  < sigma 2.61231 0.34250 7.63 3.8e-13 ***
  ---
  > (Intercept) 7.39082 2.95567 2.50 0.01297 *
  > sexmale -0.25567 0.51571 -0.50 0.62044
  > log(income) 0.37286 0.31161 1.20 0.23248
  > age -0.04467 0.01543 -2.90 0.00408 **
  > schooling -0.19524 0.14256 -1.37 0.17192
  > recparks -0.03488 0.23039 -0.15 0.87978
  > jobs -0.68706 0.19383 -3.54 0.00046 ***
  > lowrisk -0.86437 0.20823 -4.15 4.4e-05 ***
  > wildlife -0.01202 0.29107 -0.04 0.96708
  > future 0.14522 0.25379 0.57 0.56765
  > aboriginal 0.00231 0.20609 0.01 0.99108
  > finben -0.15756 0.20115 -0.78 0.43411
  > mineparks 0.53911 0.20615 2.62 0.00940 **
  > moreparks 0.52104 0.20251 2.57 0.01060 *
  > gov -1.50889 1.05768 -1.43 0.15481
  > envconyes 0.23753 0.46896 0.51 0.61291
  > vparksyes 0.27568 0.52456 0.53 0.59962
  > tvenv -0.12569 0.15555 -0.81 0.41976
  > majoryes 0.43620 0.44708 0.98 0.33007
  > L 1 -Inf 0.34251 -Inf < 2e-16 ***
  > U 1 0.69315 2.95567 0.23 0.81476
  > L 2 -Inf 0.51571 -Inf < 2e-16 ***
  > U 2 1.60944 0.31161 5.16 4.6e-07 ***
  > L 3 -Inf 0.01543 -Inf < 2e-16 ***
  > U 3 2.99573 0.14256 21.01 < 2e-16 ***
  > L 4 -Inf 0.23039 -Inf < 2e-16 ***
  > U 4 3.91202 0.19383 20.18 < 2e-16 ***
  > L 5 0.69315 0.20823 3.33 0.00099 ***
  > U 5 1.60944 0.29107 5.53 7.4e-08 ***
  > L 6 1.60944 0.25379 6.34 9.1e-10 ***
  > U 6 2.99573 0.20609 14.54 < 2e-16 ***
  > L 7 2.99573 0.20115 14.89 < 2e-16 ***
  > U 7 3.91202 0.20615 18.98 < 2e-16 ***
  > L 8 2.99573 0.20251 14.79 < 2e-16 ***
  > U 8 Inf 1.05768 Inf < 2e-16 ***
  > L 9 3.91202 0.46896 8.34 3.4e-15 ***
  > U 9 4.60517 0.52456 8.78 < 2e-16 ***
  > L 10 3.91202 0.15555 25.15 < 2e-16 ***
  > U 10 Inf 0.44708 Inf < 2e-16 ***
  > L 11 4.60517 0.34251 13.45 < 2e-16 ***
  > U 11 5.52146 2.95567 1.87 0.06279 .
  > L 12 4.60517 0.51571 8.93 < 2e-16 ***
  > U 12 Inf 0.31161 Inf < 2e-16 ***
  > L 13 5.52146 0.01543 357.93 < 2e-16 ***
  > U 13 Inf 0.14256 Inf < 2e-16 ***
  > sigma 2.61234 0.23039 11.34 < 2e-16 ***
  182a167,173
  > Warning messages:
  > 1: In coef/stdErr :
  > longer object length is not a multiple of shorter object length
  > 2: In cbind(coef, stdErr, coef/stdErr, rep(NA, length(coef))) :
  > number of rows of result is not a multiple of vector length (arg 2)
  > 3: In coef/stdErr :
  > longer object length is not a multiple of shorter object length
  232,235d222
  < The following object is masked from 'package:base':
  <
  < sign
  <
  262c249
  < BHHH maximisation, 8 iterations
  ---
  > BHHH maximisation, 12 iterations
  267,274c254,261
  < (Intercept) 1.89399 0.03865 49.01 < 2e-16 ***
  < factor(educ)2 0.21310 0.04333 4.92 9.7e-07 ***
  < factor(educ)3 0.36880 0.04173 8.84 < 2e-16 ***
  < factor(educ)4 0.53003 0.04307 12.31 < 2e-16 ***
  < factor(educ)5 0.71760 0.04168 17.22 < 2e-16 ***
  < poly(exper, 2)1 6.49887 0.35541 18.29 < 2e-16 ***
  < poly(exper, 2)2 -2.16802 0.28944 -7.49 1.2e-13 ***
  < sigma 0.28466 0.00606 46.96 < 2e-16 ***
  ---
  > (Intercept) 1.8940 0.0386 49.01 < 2e-16 ***
  > factor(educ)2 0.2131 0.0433 4.92 9.7e-07 ***
  > factor(educ)3 0.3688 0.0417 8.84 < 2e-16 ***
  > factor(educ)4 0.5300 0.0431 12.31 < 2e-16 ***
  > factor(educ)5 0.7176 0.0417 17.22 < 2e-16 ***
  > poly(exper, 2)1 6.4987 0.3554 18.28 < 2e-16 ***
  > poly(exper, 2)2 -2.1680 0.2895 -7.49 1.2e-13 ***
  > sigma 0.2847 NA NA NA
  339c326
  < BHHH maximisation, 66 iterations
  ---
  > BHHH maximisation, 97 iterations
  344,346c331,333
  < (Intercept) 0.002874 0.000871 3.30 0.0014 **
  < c 0.000121 0.000328 0.37 0.7121
  < sigma 0.003571 0.000208 17.18 <2e-16 ***
  ---
  > (Intercept) 0.002875 0.000870 3.30 0.0014 **
  > c 0.000121 0.000328 0.37 0.7128
  > sigma 0.003569 NA NA NA
• checking PDF version of manual ... OK
• DONE

Status: 1 NOTE