- using R version 3.5.0 RC (2018-04-16 r74620)
- using platform: x86_64-w64-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'enrichvs/DESCRIPTION' ... OK
- this is package 'enrichvs' version '0.0.5'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'enrichvs' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... NOTE
Checking should be performed on sources prepared by 'R CMD build'.
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s] NOTE
matplot_enrichment_curve: no visible global function definition for
'plot'
matplot_enrichment_curve: no visible global function definition for
'lines'
matplot_enrichment_curve: no visible global function definition for
'legend'
plot_enrichment_curve: no visible global function definition for 'plot'
plot_enrichment_curve: no visible global function definition for
'lines'
plot_enrichment_curve: no visible global function definition for
'plot.xy'
plot_enrichment_curve: no visible global function definition for
'xy.coords'
plot_enrichment_curve: no visible global function definition for
'rainbow'
plot_enrichment_curve: no visible global function definition for
'axTicks'
plot_enrichment_curve: no visible global function definition for 'rect'
plot_enrichment_curve: no visible global function definition for 'axis'
plot_enrichment_curve_xlog: no visible global function definition for
'plot'
plot_enrichment_curve_xlog: no visible global function definition for
'lines'
plot_enrichment_curve_xlog: no visible global function definition for
'plot.xy'
plot_enrichment_curve_xlog: no visible global function definition for
'xy.coords'
plot_enrichment_curve_xlog: no visible global function definition for
'rainbow'
plot_enrichment_curve_xlog: no visible global function definition for
'axTicks'
plot_enrichment_curve_xlog: no visible global function definition for
'rect'
plot_enrichment_curve_xlog: no visible global function definition for
'axis'
Undefined global functions or variables:
axTicks axis legend lines plot plot.xy rainbow rect xy.coords
Consider adding
importFrom("grDevices", "rainbow", "xy.coords")
importFrom("graphics", "axTicks", "axis", "legend", "lines", "plot",
"plot.xy", "rect")
to your NAMESPACE file.
- checking Rd files ... NOTE
prepare_Rd: auac.Rd:28-30: Dropping empty section \details
prepare_Rd: auac.Rd:40-42: Dropping empty section \note
prepare_Rd: auac.Rd:44-46: Dropping empty section \seealso
prepare_Rd: auc.Rd:28-30: Dropping empty section \details
prepare_Rd: auc.Rd:40-42: Dropping empty section \note
prepare_Rd: auc.Rd:44-46: Dropping empty section \seealso
prepare_Rd: bedroc.Rd:28-30: Dropping empty section \details
prepare_Rd: bedroc.Rd:40-42: Dropping empty section \note
prepare_Rd: bedroc.Rd:44-46: Dropping empty section \seealso
prepare_Rd: enrichment_factor.Rd:28-30: Dropping empty section \details
prepare_Rd: enrichment_factor.Rd:40-42: Dropping empty section \note
prepare_Rd: enrichment_factor.Rd:34-36: Dropping empty section \references
prepare_Rd: enrichment_factor.Rd:44-46: Dropping empty section \seealso
prepare_Rd: enrichvs-package.Rd:34-36: Dropping empty section \seealso
prepare_Rd: enrichvs-package.Rd:37-39: Dropping empty section \examples
prepare_Rd: matplot_enrichment_curve.Rd:22-24: Dropping empty section \details
prepare_Rd: matplot_enrichment_curve.Rd:34-36: Dropping empty section \note
prepare_Rd: matplot_enrichment_curve.Rd:28-30: Dropping empty section \references
prepare_Rd: matplot_enrichment_curve.Rd:38-40: Dropping empty section \seealso
prepare_Rd: plot_enrichment_curve.Rd:44-46: Dropping empty section \details
prepare_Rd: plot_enrichment_curve.Rd:56-58: Dropping empty section \note
prepare_Rd: plot_enrichment_curve.Rd:50-52: Dropping empty section \references
prepare_Rd: plot_enrichment_curve.Rd:60-62: Dropping empty section \seealso
prepare_Rd: plot_enrichment_curve_xlog.Rd:44-46: Dropping empty section \details
prepare_Rd: plot_enrichment_curve_xlog.Rd:56-58: Dropping empty section \note
prepare_Rd: plot_enrichment_curve_xlog.Rd:50-52: Dropping empty section \references
prepare_Rd: plot_enrichment_curve_xlog.Rd:60-62: Dropping empty section \seealso
prepare_Rd: rie.Rd:28-30: Dropping empty section \details
prepare_Rd: rie.Rd:49-51: Dropping empty section \seealso
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [1s] OK
- checking PDF version of manual ... OK
- DONE
Status: 3 NOTEs