• using R version 2.15.0 (2012-03-30)
  • using platform: x86_64-pc-mingw32 (64-bit)
  • using session charset: ISO8859-1
  • checking for file 'Cprob/DESCRIPTION' ... OK
  • this is package 'Cprob' version '1.2.1'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking whether package 'Cprob' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • loading checks for arch 'x64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    cpf: warning in match.call(expand = FALSE): partial argument match of
    'expand' to 'expand.dots'
    cpfpo: warning in match.call(expand = FALSE): partial argument match of
    'expand' to 'expand.dots'
    cpfpo: warning in factor(event, order = TRUE): partial argument match
    of 'order' to 'ordered'
    pseudocpf: warning in match.call(expand = FALSE): partial argument
    match of 'expand' to 'expand.dots'
    pseudocpf: warning in factor(event, order = TRUE): partial argument
    match of 'order' to 'ordered'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ...
    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'x64' ... OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ...
    ** running tests for arch 'i386' OK
    Running 'tests.Cprob.R'
    Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155
    < (Intercept) -3.17296435 0.04187927 1.33248215 1.7169565 0.085987112
    < age 0.04224328 1.04314823 0.01965401 3.2785824 0.001043299
    < creat 0.19314357 1.21305693 0.75242697 0.2427789 0.808176695
    ---
    > (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880
    > age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882
    > creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852
    183,184c183,184
    < age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632
    < creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423
    ---
    > age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139
    > creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320
    185a186,187
    > Warning message:
    > In sqrt(diag(x$fit$vbeta)) : NaNs produced
    195a198,199
    > Warning message:
    > In sqrt(diag(x$fit$vbeta)) : NaNs produced
    203,204c207,208
    < age 0.03787 1.03860 0.01760 2.152 0.0314 *
    < creat -0.11271 0.89341 0.15909 -0.708 0.4787
    ---
    > age 0.03787 1.03860 0.01758 2.155 0.0312 *
    > creat -0.11271 0.89341 0.15787 -0.714 0.4753
    210c214
    < creat 0.8934 1.1193 0.6541 1.220
    ---
    > creat 0.8934 1.1193 0.6557 1.217
    211a216,217
    > Warning message:
    > In sqrt(diag(object$fit$vbeta)) : NaNs produced
    226c232
    < creat 0.8934 1.1193 0.6541 1.220
    ---
    > creat 0.8934 1.1193 0.6557 1.217
    227a234,235
    > Warning message:
    > In sqrt(diag(object$fit$vbeta)) : NaNs produced
    314a323,325
    > Warning messages:
    > 1: In sqrt(diag(object$fit$vbeta)) : NaNs produced
    > 2: In sqrt(diag(object$fit$vbeta)) : NaNs produced
    ** running tests for arch 'x64' OK
    Running 'tests.Cprob.R'
    Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155
    < (Intercept) -3.17296435 0.04187927 1.33248215 1.1231049 0.2613930
    < age 0.04224328 1.04314823 0.01965401 -1.0279659 0.3039659
    < creat 0.19314357 1.21305693 0.75242697 0.4010676 0.6883703
    ---
    > (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880
    > age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882
    > creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852
    183,184c183,184
    < age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632
    < creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423
    ---
    > age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139
    > creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320
    207,208c207,208
    < age 0.03787 1.03860 0.01760 2.152 0.0314 *
    < creat -0.11271 0.89341 0.15909 -0.708 0.4787
    ---
    > age 0.03787 1.03860 0.01758 2.155 0.0312 *
    > creat -0.11271 0.89341 0.15787 -0.714 0.4753
    214c214
    < creat 0.8934 1.1193 0.6541 1.220
    ---
    > creat 0.8934 1.1193 0.6557 1.217
    232c232
    < creat 0.8934 1.1193 0.6541 1.220
    ---
    > creat 0.8934 1.1193 0.6557 1.217
  • checking PDF version of manual ... OK
    NOTE: There was 1 note.
    See
    'd:/Rcompile/CRANpkg/local/2.15/Cprob.Rcheck/00check.log'
    for details.