- using R version 2.15.0 (2012-03-30)
- using platform: x86_64-pc-mingw32 (64-bit)
- using session charset: ISO8859-1
- checking for file 'Cprob/DESCRIPTION' ... OK
- this is package 'Cprob' version '1.2.1'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking whether package 'Cprob' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
cpf: warning in match.call(expand = FALSE): partial argument match of
'expand' to 'expand.dots'
cpfpo: warning in match.call(expand = FALSE): partial argument match of
'expand' to 'expand.dots'
cpfpo: warning in factor(event, order = TRUE): partial argument match
of 'order' to 'ordered'
pseudocpf: warning in match.call(expand = FALSE): partial argument
match of 'expand' to 'expand.dots'
pseudocpf: warning in factor(event, order = TRUE): partial argument
match of 'order' to 'ordered'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
- checking for unstated dependencies in tests ... OK
- checking tests ...
** running tests for arch 'i386' OK
Running 'tests.Cprob.R'
Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155
< (Intercept) -3.17296435 0.04187927 1.33248215 1.7169565 0.085987112
< age 0.04224328 1.04314823 0.01965401 3.2785824 0.001043299
< creat 0.19314357 1.21305693 0.75242697 0.2427789 0.808176695
---
> (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880
> age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882
> creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852
183,184c183,184
< age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632
< creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423
---
> age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139
> creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320
185a186,187
> Warning message:
> In sqrt(diag(x$fit$vbeta)) : NaNs produced
195a198,199
> Warning message:
> In sqrt(diag(x$fit$vbeta)) : NaNs produced
203,204c207,208
< age 0.03787 1.03860 0.01760 2.152 0.0314 *
< creat -0.11271 0.89341 0.15909 -0.708 0.4787
---
> age 0.03787 1.03860 0.01758 2.155 0.0312 *
> creat -0.11271 0.89341 0.15787 -0.714 0.4753
210c214
< creat 0.8934 1.1193 0.6541 1.220
---
> creat 0.8934 1.1193 0.6557 1.217
211a216,217
> Warning message:
> In sqrt(diag(object$fit$vbeta)) : NaNs produced
226c232
< creat 0.8934 1.1193 0.6541 1.220
---
> creat 0.8934 1.1193 0.6557 1.217
227a234,235
> Warning message:
> In sqrt(diag(object$fit$vbeta)) : NaNs produced
314a323,325
> Warning messages:
> 1: In sqrt(diag(object$fit$vbeta)) : NaNs produced
> 2: In sqrt(diag(object$fit$vbeta)) : NaNs produced
** running tests for arch 'x64' OK
Running 'tests.Cprob.R'
Comparing 'tests.Cprob.Rout' to 'tests.Cprob.Rout.save' ...153,155c153,155
< (Intercept) -3.17296435 0.04187927 1.33248215 1.1231049 0.2613930
< age 0.04224328 1.04314823 0.01965401 -1.0279659 0.3039659
< creat 0.19314357 1.21305693 0.75242697 0.4010676 0.6883703
---
> (Intercept) -3.17296435 0.04187927 1.33248215 0.2465093 0.8052880
> age 0.04224328 1.04314823 0.01965401 -0.6819222 0.4952882
> creat 0.19314357 1.21305693 0.75242697 0.1301027 0.8964852
183,184c183,184
< age 0.03787388 1.0386002 0.01759928 2.1520132 0.03139632
< creat -0.11270506 0.8934141 0.15908985 -0.7084365 0.47867423
---
> age 0.03787388 1.0386002 0.01757588 2.1548779 0.03117139
> creat -0.11270506 0.8934141 0.15786668 -0.7139256 0.47527320
207,208c207,208
< age 0.03787 1.03860 0.01760 2.152 0.0314 *
< creat -0.11271 0.89341 0.15909 -0.708 0.4787
---
> age 0.03787 1.03860 0.01758 2.155 0.0312 *
> creat -0.11271 0.89341 0.15787 -0.714 0.4753
214c214
< creat 0.8934 1.1193 0.6541 1.220
---
> creat 0.8934 1.1193 0.6557 1.217
232c232
< creat 0.8934 1.1193 0.6541 1.220
---
> creat 0.8934 1.1193 0.6557 1.217
- checking PDF version of manual ... OK
NOTE: There was 1 note.
See
'd:/Rcompile/CRANpkg/local/2.15/Cprob.Rcheck/00check.log'
for details.