• using R version 2.15.3 Patched (2013-03-13 r62287)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: UTF-8
• checking for file ‘structSSI/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘structSSI’ version ‘1.0’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: ‘phyloseq’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘structSSI’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... ERROR
  Running examples in ‘structSSI-Ex.R’ failed
  The error most likely occurred in:
  
  > ### Name: treePValues
  > ### Title: Create tree of p-values for phyloseq data
  > ### Aliases: treePValues
  >
  > ### ** Examples
  >
  > ## Load data from the phyloseq package
  > library(phyloseq)
  Error in library(phyloseq) : there is no package called ‘phyloseq’
  Execution halted
• elapsed time (check, wall clock): 1:00