• using R version 2.15.0 (2012-03-30)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'pathClass/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'pathClass' version '0.9.3'
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Packages suggested but not available for checking:
  'hu6800.db' 'golubEsets'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package 'pathClass' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  crossval: no visible global function definition for 'mclapply'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking installed files from 'inst/doc' ... OK
• checking examples ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... WARNING
  Errors in running code in vignettes:
  when running code in 'pathClass.rnw'
  ...
  lowess
  
  Loading required package: igraph
  Loading required package: lpSolve
  
  > library(golubEsets)
  
  When sourcing 'pathClass.R':
  Error: there is no package called 'golubEsets'
  Execution halted
  
• checking re-building of vignette PDFs ... NOTE
  Error in re-building vignettes:
  ...
  
  The following object(s) are masked from 'package:utils':
  
  object.size
  
  Loading required package: caTools
  Loading required package: bitops
  Loading required package: grid
  Loading required package: KernSmooth
  KernSmooth 2.23 loaded
  Copyright M. P. Wand 1997-2009
  
  Attaching package: 'gplots'
  
  The following object(s) are masked from 'package:stats':
  
  lowess
  
  Loading required package: igraph
  Loading required package: lpSolve
  
  Error: processing vignette 'pathClass.rnw' failed with diagnostics:
  chunk 2 (label = loadALLpackage)
  Error in library(golubEsets) : there is no package called 'golubEsets'
  Execution halted
  
• checking PDF version of manual ... OK
  WARNING: There was 1 warning.
  NOTE: There were 3 notes.
  See
  '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/pathClass.Rcheck/00check.log'
  for details.
• elapsed time (check, wall clock): 1:45