- using R version 2.15.3 (2013-03-01)
- using platform: i386-apple-darwin9.8.0 (32-bit)
- using session charset: UTF-8
- checking for file ‘multcomp/DESCRIPTION’ ... OK
- this is package ‘multcomp’ version ‘1.2-17’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘multcomp’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking examples ... OK
- checking differences from ‘multcomp-Ex.Rout’ to ‘multcomp-Ex.Rout.save’ ...
277c277
< The following object(s) are masked from 'package:base':
---
> The following object is masked from 'package:base':
505c505
< D - B == 0 4.3333 0.8679 4.993 0.000531 ***
---
> D - B == 0 4.3333 0.8679 4.993 0.000398 ***
574c574
< The following object(s) are masked from 'package:base':
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> The following object is masked from 'package:base':
938,939c938,939
< otrend >= 0 -3.4821 2.0867 -1.669 0.2185
< atrend >= 0 -314.7324 408.9901 -0.770 0.6625
---
> otrend >= 0 -3.4821 2.0867 -1.669 0.2182
> atrend >= 0 -314.7324 408.9901 -0.770 0.6621
1241c1241
< The following object(s) are masked from 'package:nlme':
---
> The following object is masked from 'package:nlme':
1245c1245
< The following object(s) are masked from 'package:stats':
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> The following object is masked from 'package:stats':
OK
- checking for unstated dependencies in tests ... OK
- checking tests ... OK
Running ‘bugfix.R’
Comparing ‘bugfix.Rout’ to ‘bugfix.Rout.save’ ...350,351c350,351
< Male Female
< "b" "a"
---
> Female Male
> "a" "b"
Running ‘regtest-Tukey.R’
Comparing ‘regtest-Tukey.Rout’ to ‘regtest-Tukey.Rout.save’ ... OK
Running ‘regtest-anova.R’
Comparing ‘regtest-anova.Rout’ to ‘regtest-anova.Rout.save’ ...50c50
< The following object(s) are masked from 'package:base':
---
> The following object is masked from 'package:base':
Running ‘regtest-interface.R’
Comparing ‘regtest-interface.Rout’ to ‘regtest-interface.Rout.save’ ... OK
Running ‘regtest-lme.R’
Comparing ‘regtest-lme.Rout’ to ‘regtest-lme.Rout.save’ ...14c14
< The following object(s) are masked from 'package:stats':
---
> The following object is masked from 'package:stats':
63c63
< The following object(s) are masked from 'package:lme4':
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> The following object is masked from 'package:lme4':
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in ‘inst/doc’ ... OK
- checking running R code from vignettes ... OK
- checking re-building of vignette PDFs ... OK
- checking PDF version of manual ... OK
- elapsed time (check, wall clock): 2:38