- using R version 2.10.0 beta (2009-10-12 r50045)
- using session charset: ASCII
- checking for file 'labdsv/DESCRIPTION' ... OK
- this is package 'labdsv' version '1.3-1'
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking for executable files ... OK
- checking whether package 'labdsv' can be installed ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... WARNING
Obsolete package(s) 'mva' in Rd xrefs
Unknown package(s) 'optpart' in Rd xrefs
Missing link(s) in documentation object './man/duarm.Rd':
'[labdsv]{partana}'
Missing link(s) in documentation object './man/matrify.Rd':
''
Missing link(s) in documentation object './man/nmds.Rd':
'[labdsv]{isoMDS}'
Missing link(s) in documentation object './man/pca.Rd':
'[MASS]{prcomp}' '[labdsv]{fso}'
Missing link(s) in documentation object './man/pco.Rd':
'[MASS]{cmdscale}'
Missing link(s) in documentation object './man/plot.pca.Rd':
'[vegan]{vegan}'
See the information in section 'Cross-references' of the 'Writing R
Extensions' manual.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking data for non-ASCII characters ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $BLAS_LIBS ... OK
- checking examples ... OK
- checking PDF version of manual ... OK
- elapsed time (check, wall clock): 0:46