Check results for 'intamap'

using R version 2.15.3 (2013-03-01)
using platform: i386-apple-darwin9.8.0 (32-bit)
using session charset: ASCII
checking for file 'intamap/DESCRIPTION' ... OK
this is package 'intamap' version '1.3-25'
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking whether package 'intamap' can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking loading without being on the library search path ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of 'data' directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking examples ... OK
checking for unstated dependencies in tests ... OK
checking tests ... OK
Running 'anisotropyTest.R'
Comparing 'anisotropyTest.Rout' to 'anisotropyTest.Rout.save' ...244,247c244,248
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
251c252
< 1st Qu.: 20626 1st Qu.:136146 1st Qu.:141.8 1st Qu.:18002
---
> 1st Qu.: 20626 1st Qu.:136147 1st Qu.:141.8 1st Qu.:18002
254c255
< 3rd Qu.: 94458 3rd Qu.:210897 3rd Qu.:155.2 3rd Qu.:20372
---
> 3rd Qu.: 94458 3rd Qu.:210897 3rd Qu.:155.2 3rd Qu.:20373
Running 'block.R'
Comparing 'block.Rout' to 'block.Rout.save' ...73,76c73,77
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
99c100
< Mean :0.0143819 Mean :7.713 Mean :0.19837 Mean :4.507
---
> Mean :0.0143819 Mean :7.713 Mean :0.19836 Mean :4.507
101c102
< Max. :0.0411645 Max. :8.326 Max. :0.41361 Max. :4.954
---
> Max. :0.0411645 Max. :8.326 Max. :0.41356 Max. :4.954
Running 'idw.R'
Comparing 'idw.Rout' to 'idw.Rout.save' ...34,37c34,38
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
98,103c99,104
< Min. :4020568 Min. :3102569 Min. : 116.6
< 1st Qu.:4021552 1st Qu.:3103401 1st Qu.: 253.4
< Median :4022145 Median :3104136 Median : 344.4
< Mean :4022165 Mean :3104246 Mean : 411.2
< 3rd Qu.:4022771 3rd Qu.:3104998 3rd Qu.: 511.9
< Max. :4023832 Max. :3106558 Max. :1827.1
---
> Min. :4020608 Min. :3102661 Min. : 116.6
> 1st Qu.:4021592 1st Qu.:3103493 1st Qu.: 253.4
> Median :4022185 Median :3104228 Median : 344.4
> Mean :4022205 Mean :3104338 Mean : 411.2
> 3rd Qu.:4022811 3rd Qu.:3105090 3rd Qu.: 511.9
> Max. :4023872 Max. :3106651 Max. :1827.1
Running 'interpolate.R'
Comparing 'interpolate.Rout' to 'interpolate.Rout.save' ...26c26
< R 2013-03-28 07:40:46 interpolating 155 observations, 100 prediction locations
---
> R 2013-03-21 17:42:39 interpolating 155 observations, 100 prediction locations
29,32c29,33
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
67c68
< R 2013-03-28 07:40:47 interpolating 155 observations, 100 prediction locations
---
> R 2013-03-21 17:42:40 interpolating 155 observations, 100 prediction locations
130c131
< R 2013-03-28 07:40:47 interpolating 155 observations, 100 prediction locations
---
> R 2013-03-21 17:42:40 interpolating 155 observations, 100 prediction locations
157c158
< R 2013-03-28 07:40:48 interpolating 30 observations, 24 prediction locations
---
> R 2013-03-21 17:42:40 interpolating 30 observations, 24 prediction locations
163c164
< R 2013-03-28 07:40:52 interpolating 30 observations, 24 prediction locations
---
> R 2013-03-21 17:42:44 interpolating 30 observations, 24 prediction locations
187,192c188,193
< Min. :179037 Min. :330314 Min. : 203.9 Min. : 5723
< 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.7 1st Qu.: 24184
< Median :179932 Median :331806 Median : 536.9 Median : 51920840
< Mean :179932 Mean :331806 Mean : 737.8 Mean : 50269441
< 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1197.2 3rd Qu.:100000000
< Max. :180827 Max. :333298 Max. :1609.5 Max. :100000000
---
> Min. :179037 Min. :330314 Min. : 203.9 Min. : 5741
> 1st Qu.:179485 1st Qu.:330911 1st Qu.: 290.6 1st Qu.: 24420
> Median :179932 Median :331806 Median : 536.2 Median : 51941780
> Mean :179932 Mean :331806 Mean : 731.0 Mean : 50271919
> 3rd Qu.:180380 3rd Qu.:332701 3rd Qu.:1177.4 3rd Qu.:100000000
> Max. :180827 Max. :333298 Max. :1584.7 Max. :100000000
194,199c195,200
< Min. :0.0002259 Min. :186.3
< 1st Qu.:0.0064258 1st Qu.:237.7
< Median :0.0882522 Median :340.5
< Mean :0.1286774 Mean :386.1
< 3rd Qu.:0.2171630 3rd Qu.:481.7
< Max. :0.4152400 Max. :857.0
---
> Min. :0.000230 Min. :186.2
> 1st Qu.:0.006538 1st Qu.:237.6
> Median :0.087995 Median :339.6
> Mean :0.127678 Mean :384.6
> 3rd Qu.:0.214219 3rd Qu.:479.0
> Max. :0.414578 Max. :855.8
Running 'interpolateBlock.R'
Comparing 'interpolateBlock.Rout' to 'interpolateBlock.Rout.save' ...24c24
< R 2013-03-28 07:40:55 interpolating 155 observations, 48 prediction locations
---
> R 2013-03-21 17:42:47 interpolating 155 observations, 48 prediction locations
30,33c30,34
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
73c74
< R 2013-03-28 07:40:55 interpolating 155 observations, 48 prediction locations
---
> R 2013-03-21 17:42:48 interpolating 155 observations, 48 prediction locations
Running 'javaR.R'
Comparing 'javaR.Rout' to 'javaR.Rout.save' ...43,46c43,47
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
Running 'linearVariogram.R'
Comparing 'linearVariogram.Rout' to 'linearVariogram.Rout.save' ...42,45c42,46
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
68,69c69,70
< x 4020670 4023754
< y 3102639 3106521
---
> x 4020710 4023794
> y 3102731 3106613
73c74
< +y_0=3210000 +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +units=m +no_defs]
---
> +y_0=3210000 +ellps=GRS80 +units=m +no_defs]
88,89c89,90
< x 4020670 4023754
< y 3102639 3106521
---
> x 4020710 4023794
> y 3102731 3106613
93c94
< +y_0=3210000 +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +units=m +no_defs]
---
> +y_0=3210000 +ellps=GRS80 +units=m +no_defs]
Running 'minimal.R'
Comparing 'minimal.Rout' to 'minimal.Rout.save' ...50,53c50,54
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
Running 'transGaussian.R'
Comparing 'transGaussian.Rout' to 'transGaussian.Rout.save' ...19c19
< R 2013-03-28 07:41:08 interpolating 155 observations, 3103 prediction locations
---
> R 2013-03-21 17:42:58 interpolating 155 observations, 3103 prediction locations
23,26c23,27
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
38c39
< Median :179980 Median :331220 Median : 283.2 Median : 16730
---
> Median :179980 Median :331220 Median : 283.2 Median : 16731
Running 'unbiased.R'
Comparing 'unbiased.Rout' to 'unbiased.Rout.save' ...46,49c46,50
< Loaded GDAL runtime: GDAL 1.9.0, released 2011/12/29
< Path to GDAL shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/gdal
< Loaded PROJ.4 runtime: Rel. 4.8.0, 6 March 2012, [PJ_VERSION: 480]
< Path to PROJ.4 shared files: /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/rgdal/proj
---
> Loaded GDAL runtime: GDAL 1.9.2, released 2012/10/08
> Path to GDAL shared files: C:/Program Files/R/R-2.15.3/library/rgdal/gdal
> GDAL does not use iconv for recoding strings.
> Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
> Path to PROJ.4 shared files: C:/Program Files/R/R-2.15.3/library/rgdal/proj
checking PDF version of manual ... OK
elapsed time (check, wall clock): 2:22