Check results for 'gdata'

using R version 2.15.1 (2012-06-22)
using platform: i386-apple-darwin9.8.0 (32-bit)
using session charset: ASCII
checking for file 'gdata/DESCRIPTION' ... OK
this is package 'gdata' version '2.12.0'
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking whether package 'gdata' can be installed ... OK
checking installed package size ... OK
checking package directory ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking for unstated dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... OK
checking Rd files ... OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... NOTE
S3 methods shown with full name in documentation object 'aggregate.table':
'aggregate.table'

The \usage entries for S3 methods should use the \method markup and not
their full name.
See the chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of 'data' directory ... OK
checking data for non-ASCII characters ... OK
checking data for ASCII and uncompressed saves ... OK
checking sizes of PDF files under 'inst/doc' ... OK
checking installed files from 'inst/doc' ... OK
checking examples ... OK
checking for unstated dependencies in tests ... OK
checking tests ... OK
Running 'test.read.xls.R'
Comparing 'test.read.xls.Rout' to 'test.read.xls.Rout.save' ...6,11c6
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
<
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
28,34d22
< Can't locate object method "load" via package "CPAN::HandleConfig" (perhaps you forgot to load "CPAN::HandleConfig"?) at /Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/gdata.Rcheck/gdata/perl/module_tools.pl line 89.
< Error in installXLSXsupport() :
< Unable to install Perl XLSX support libraries.
<
<
< In addition: Warning message:
< running command ''/usr/bin/perl' '/Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/gdata.Rcheck/gdata/perl/install_modules.pl'' had status 22
40,42d27
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
197,199d181
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
354,356d335
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
521,523d499
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
527a504
> [1] 4
530,532d506
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
537a512,513
> [1] "Sheet First" "Sheet Second"
> [3] "Sheet with a very long name!" "Sheet with initial text"
540,542d515
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
554,556d526
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
565,567d534
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
582,584d548
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
618a583,627
> A B C
> 1 1 1 1
> 2 2 4 8
> 3 3 9 27
> 4 4 16 64
> 5 5 25 125
> 6 6 36 216
> 7 7 49 343
> X D E. F G Factor
> 1 FirstRow 1 NA NA NA Red
> 2 SecondRow 2 1 NA NA Green
> 3 ThirdRow 3 2 1 NA Red
> 4 FourthRow 4 3 2 1 Black
> V1 V2 V3 V4 V5 V6
> 1 1 2001-01-01 1:01 0.2058182 NA A
> 2 2 2002-02-02 2:02 0.2910708 NA B
> 3 3 2003-03-03 3:03 0.3564875 -0.84147098 C
> 4 4 2004-04-04 4:04 0.4116363 0.70807342
> 5 5 2005-05-05 5:05 0.4602234 0.50136797 A
> 6 6 2006-06-06 6:06 NA 0.25136984 B
> 7 7 2007-07-07 7:07 0.5445436 0.06318679 B
> 8 8 2008-08-08 8:08 0.5821416 NA C
> 9 9 2009-09-09 9:09 0.6174545 0.00000000 A
> 10 10 2010-10-10 10:10 0.6508541 0.00000000 A
> V1 V2 V3 V4 V5 V6
> 1 1 2001-01-01 1:01 0.2058182 NA A
> 2 2 2002-02-02 2:02 0.2910708 NA B
> 3 3 2003-03-03 3:03 0.3564875 -0.84147098 C
> 4 4 2004-04-04 4:04 0.4116363 0.70807342
> 5 5 2005-05-05 5:05 0.4602234 0.50136797 A
> 6 6 2006-06-06 6:06 NA 0.25136984 B
> 7 7 2007-07-07 7:07 0.5445436 0.06318679 B
> 8 8 2008-08-08 8:08 0.5821416 NA C
> 9 9 2009-09-09 9:09 0.6174545 0.00000000 A
> 10 10 2010-10-10 10:10 0.6508541 0.00000000 A
> X D E. F G Factor
> 1 FirstRow 1 NA NA NA Red
> 2 SecondRow 2 1 NA NA Green
> 3 ThirdRow 3 2 1 NA Red
> 4 FourthRow 4 3 2 1 Black
> X X.1 D E. F G Factor
> 1 NA FirstRow 1 NA NA NA Red
> 2 NA SecondRow 2 1 NA NA Green
> 3 NA ThirdRow 3 2 1 NA Red
> 4 NA FourthRow 4 3 2 1 Black
624,626d632
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
639a646,651
> X D E. F G Factor
> 1 FirstRow 1 NA NA NA Red
> 2 SecondRow 2 1 NA NA Green
> 3 NA NA NA NA
> 4 ThirdRow 3 2 1 NA Red
> 5 FourthRow 4 3 2 1 Black
648,655d659
< WARNING: Perl module Compress::Raw::Zlib cannot be loaded.
< WARNING: Perl module Spreadsheet::XLSX cannot be loaded.
< WARNING: Microsoft Excel 2007 'XLSX' formatted files will not be processed.
< Warning messages:
< 1: In read.table(file = file, header = header, sep = sep, quote = quote, :
< invalid input found on input connection '/tmp/Rtmp3y9Nly/file1819d5fd710a5.csv'
< 2: In read.table(file = file, header = header, sep = sep, quote = quote, :
< incomplete final line found by readTableHeader on '/tmp/Rtmp3y9Nly/file1819d5fd710a5.csv'
Running 'test.write.fwf.eol.R'
Running 'tests.write.fwf.R'
Comparing 'tests.write.fwf.Rout' to 'tests.write.fwf.Rout.save' ...13,18c13
< gdata: Unable to load perl libaries needed by read.xls()
< gdata: to support 'XLSX' (Excel 2007+) files.
<
< gdata: Run the function 'installXLSXsupport()'
< gdata: to automatically download and install the perl
< gdata: libaries needed to support Excel XLS and XLSX formats.
---
> gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
checking for unstated dependencies in vignettes ... OK
checking package vignettes in 'inst/doc' ... OK
checking running R code from vignettes ... OK
checking re-building of vignette PDFs ... OK
checking PDF version of manual ... OK
NOTE: There was 1 note.
See
'/Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/gdata.Rcheck/00check.log'
for details.
elapsed time (check, wall clock): 0:42