• using R version 2.14.0 RC (2011-10-24 r57417)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'fpc/DESCRIPTION' ... OK
• this is package 'fpc' version '2.0-3'
• checking package dependencies ... NOTE
  Package suggested but not available for checking: 'prabclus'
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
• checking for executable files ... OK
• checking whether package 'fpc' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File 'fpc/R/fpc.R':
  .First.lib calls:
  require(cluster)
  require(MASS)
  
  Package startup functions should not change the search path.
  See section 'Good practice' in ?.onAttach.
  
  dip.pvalue: no visible binding for global variable 'qDiptab'
  distnoisemclustCBI: no visible global function definition for 'NNclean'
  mergenormCBI: no visible global function definition for 'NNclean'
  noisemclustCBI: no visible global function definition for 'NNclean'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... NOTE
  Package(s) unavailable to check Rd xrefs: 'prabclus'
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... ERROR
  Running examples in 'fpc-Ex.R' failed
  The error most likely occurred in:
  
  > ### Name: kmeansCBI
  > ### Title: Interface functions for clustering methods
  > ### Aliases: kmeansCBI hclustCBI hclusttreeCBI disthclustCBI noisemclustCBI
  > ### distnoisemclustCBI claraCBI pamkCBI trimkmeansCBI disttrimkmeansCBI
  > ### dbscanCBI mahalCBI mergenormCBI
  > ### Keywords: cluster multivariate
  >
  > ### ** Examples
  >
  > set.seed(20000)
  > face <- rFace(50,dMoNo=2,dNoEy=0,p=2)
  > dbs <- dbscanCBI(face,eps=1.5,MinPts=4)
  > dhc <- disthclustCBI(dist(face),method="average",k=1.5,noisecut=2)
  > table(dbs$partition,dhc$partition)
  
  1 2 3 4 5 6
  1 15 0 0 0 0 1
  2 0 5 4 0 0 0
  3 0 0 0 9 0 0
  4 0 0 0 0 5 0
  5 0 0 0 0 0 11
  > mergenormCBI(face,G=10,emModelNames="EEE",nnk=2)
  Loading required package: prabclus
  Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
  there is no package called 'prabclus'
  Error in mergenormCBI(face, G = 10, emModelNames = "EEE", nnk = 2) :
  could not find function "NNclean"
  Execution halted
• elapsed time (check, wall clock): 1:03